| Protein: | MED27 |
| Organism: | Homo sapiens |
| Length: | 311 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED27.
| Description | E-value | Query Range |
Subject Range |
|
|
597.0 | [0..1] | [311..1] |
|
|
595.0 | [0..1] | [311..1] |
|
|
595.0 | [0..1] | [311..1] |
|
|
594.0 | [0..1] | [311..1] |
|
|
594.0 | [0..1] | [311..1] |
|
|
593.0 | [0..1] | [311..1] |
|
|
571.0 | [0..1] | [311..33] |
|
|
571.0 | [0..1] | [311..1] |
|
|
569.0 | [0..1] | [311..1] |
|
|
564.0 | [0..1] | [311..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MADVINVSVN LEAFSQAISA IQALRSSVSR VFDCLKDGMR NKETLEGREK AFIAHFQDNL 60
61 HSVNRDLNEL ERLSNLVGKP SENHPLHNSG LLSLDPVQDK TPLYSQLLQA YKWSNKLQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.879 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.849 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.819 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.799 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.798 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.757 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.749 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.669 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.621 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.583 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [119-225] |
1 11 21 31 41 51
| | | | | |
1 YHAGLASGLL NQQSLKRSAN QMGVSAKRRP KAQPTTLVLP PQYVDDVISR IDRMFPEMSI 60
61 HLSRPNGTSA MLLVTLGKVL KVIVVMRSLF IDRTIVKGYN ENVYTED
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.690 | d.189.1 | PX domain |
| View | Download | 0.647 | a.2.7 | tRNA-binding arm |
| View | Download | 0.613 | d.189.1 | PX domain |
| View | Download | 0.604 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.595 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.494 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.455 | a.2.7 | tRNA-binding arm |
| View | Download | 0.350 | d.189.1 | PX domain |
| View | Download | 0.336 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.322 | a.2.3 | Chaperone J-domain |
|
Region A: Residues: [226-311] |
1 11 21 31 41 51
| | | | | |
1 GKLDIWSKSN YQVFQKVTDH ATTALLHYQL PQMPDVVVRS FMTWLRSYIK LFQAPCQRCG 60
61 KFLQDGLPPT WRDFRTLEAF HDTCRQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.836 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.828 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.821 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.817 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.766 | N/A | N/A | a.7.12 | Description not found. |
| View | Download | 0.723 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.717 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.694 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.690 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
