| Protein: | IL1B |
| Organism: | Homo sapiens |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IL1B.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..269] | [32..300] |
|
|
0.0 | [1..269] | [1..269] |
|
|
0.0 | [1..269] | [1..269] |
|
|
0.0 | [1..269] | [1..269] |
|
|
0.0 | [1..269] | [1..269] |
|
|
0.0 | [1..269] | [1..269] |
|
|
0.0 | [1..268] | [1..268] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MAEVPELASE MMAYYSGNED DLFFEADGPK QMKCSFQDLD LCPLDGGIQL RISDHHYSKG 60
61 FRQAASVVVA MDKLRKMLVP CPQTFQENDL STFFPFIFE
|
| Detection Method: |  |
| Confidence: | 62.420216 |
| Match: | PF02394.7 |
| Description: | No description for PF02394.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-269] |
1 11 21 31 41 51
| | | | | |
1 EEPIFFDTWD NEAYVHDAPV RSLNCTLRDS QQKSLVMSGP YELKALHLQG QDMEQQVVFS 60
61 MSFVQGEESN DKIPVALGLK EKNLYLSCVL KDDKPTLQLE SVDPKNYPKK KMEKRFVFNK 120
121 IEINNKLEFE SAQFPNWYIS TSQAENMPVF LGGTKGGQDI TDFTMQFVSS
|
| Detection Method: | |
| Confidence: | 59.221849 |
| Match: | 1i1bA |
| Description: | CRYSTAL STRUCTURE OF RECOMBINANT HUMAN INTERLEUKIN-1BETA AT 2.0 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| growth factor activity | 5.6790632853895 | bayes_pls_golite062009 |
| cytokine activity | 4.92514805273922 | bayes_pls_golite062009 |
| receptor binding | 4.8109037277027 | bayes_pls_golite062009 |
| fibroblast growth factor receptor binding | 3.82623893122433 | bayes_pls_golite062009 |
| protein binding | 2.99442649109752 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.49177421879896 | bayes_pls_golite062009 |
| binding | 2.47177194764362 | bayes_pls_golite062009 |
| heparin binding | 2.1616134585534 | bayes_pls_golite062009 |
| interleukin-1 receptor binding | 2.01634458410435 | bayes_pls_golite062009 |
| polysaccharide binding | 1.81686028727894 | bayes_pls_golite062009 |
| chemoattractant activity | 1.42155423144626 | bayes_pls_golite062009 |
| interleukin-1, Type I receptor binding | 0.909481376669721 | bayes_pls_golite062009 |
| pattern binding | 0.323275442862789 | bayes_pls_golite062009 |
| nerve growth factor receptor binding | 0.308245352535379 | bayes_pls_golite062009 |
| tumor necrosis factor receptor superfamily binding | 0.0626824359203906 | bayes_pls_golite062009 |
| transporter activity | 0.0547618159251159 | bayes_pls_golite062009 |
