YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: KRT17
Organism: Homo sapiens
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRT17.

Description E-value Query
Range
Subject
Range
gi|73996557 - gi|73996557|ref|XP_850166.1| PREDICTED: similar to keratin, hair, basic, 3 [Canis familiaris]
8.0E-66 [3..397] [118..515]
gi|109096771 - gi|109096771|ref|XP_001093676.1| PREDICTED: keratin, hair, basic, 4 [Macaca mulatta]
2.0E-65 [2..397] [60..478]
gi|109481333 - gi|109481333|ref|XP_001064779.1| PREDICTED: similar to keratin Kb40 [Rattus norvegicus]
3.0E-65 [36..398] [205..569]
gi|42760016 - gi|42760016|emb|CAF31524.1| type II hair keratin 4 [Homo sapiens]
6.0E-64 [44..397] [123..476]
gi|114644580 - gi|114644580|ref|XP_522389.2| PREDICTED: keratin, hair, basic, 4 [Pan troglodytes]
4.0E-63 [44..397] [125..478]

Back

Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSIRQFTS SSSIKGSSGL GGGSSRTSCR LSGGLGAGSC RLGSAGGLGS TLGGSSYSSC  60
   61 YSFGSGGGYG SSFGGVDGLL AGGEKATMQN LNDRLASY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDKVRALEEA NTELEVKIRD WYQRQAPGPA RDYSQYYRTI EELQNKILTA TVDNANILLQ  60
   61 IDNARLAADD FRTKFETEQA LRLSVEADIN GLRRVLDELT LARADLEMQI ENLKEELAYL 120
  121 KKNHEEEMNA LRGQVGGEIN VEMDAAPGVD LSRILNEMRD QYEKMAEKNR KDAEDWFFSK 180
  181 TEELNREVAT NSELVQSGKS EISELRRTMQ ALEIELQSQL SMKASLEGNL AETENRYCVQ 240
  241 LSQIQGLIGS VEEQLAQLRC EMEQQNQEYK ILLDVKTRLE QEIATYRRLL EGEDAHLTQY 300
  301 KKEPVTTRQV RTIVEEVQDG KVISSREQVH QTTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle