| Protein: | YQIG_ECOLI |
| Organism: | Escherichia coli |
| Length: | 821 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQIG_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
846.0 | [0..5] | [818..25] |
|
|
836.0 | [0..6] | [821..26] |
|
|
814.0 | [0..5] | [814..16] |
|
|
814.0 | [0..5] | [814..16] |
|
|
811.0 | [0..5] | [814..16] |
|
|
811.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..16] |
|
|
809.0 | [0..5] | [814..31] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MSGNIGANPV IIIGCASAYA VEFNKDLIEA EDRENVNLSQ FETDGQLPVG KYSLSTLINN 60
61 KRTPIHLDLQ WVLIDNQTAV CVTPEQLTLL GFTDEFIEKT QQNLIDGCYP IEKEKQITTY 120
121 LDKGKMQLSI SAPQAWLKYK DAN
|
| Detection Method: |  |
| Confidence: | 28.522879 |
| Match: | 1ze3D |
| Description: | Crystal Structure of the Ternary Complex of FIMD (N-Terminal Domain) with FIMC and the Pilin Domain of FIMH |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| fimbrial usher porin activity | 3.07403393180075 | bayes_pls_golite062009 |
| porin activity | 1.02120594936422 | bayes_pls_golite062009 |
|
Region A: Residues: [144-258] |
1 11 21 31 41 51
| | | | | |
1 WTPPELWNHG IAGAFLDYNL YASHYAPHQG DNSQNISSYG QAGVNLGAWR LRTDYQYDQS 60
61 FNNGKSQATN LDFPRIYLFR PIPAMNAKLT IGQYDTESSI FDSFHFSGIS LKSDE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.329 | d.93.1 | SH2 domain |
| View | Download | 0.239 | a.77.1 | DEATH domain |
| View | Download | 0.205 | d.82.2 | Frataxin-like |
| View | Download | 0.298 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.302 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
|
Region A: Residues: [259-390] |
1 11 21 31 41 51
| | | | | |
1 NMLPPDLRGY APQITGVAQT NAKVTVSQNN RIIYQENVPP GPFAITNLFN TLQGQLDVKV 60
61 EEEDGRVTQW QVASNSIPYL TRKGQIRYTT AMGKPTSVGG DSLQQPFFWT GEFSWGWLNN 120
121 VSLYGGSVLT NR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.287 | 0.128 | cell projection | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.424 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.259 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.256 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.245 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
|
Region A: Residues: [391-544] |
1 11 21 31 41 51
| | | | | |
1 DYQSLAAGVG FNLNSLGSLS FDVTRSDAQL HNQDKETGYS YRANYSKRFE STGSQLTFAG 60
61 YRFSDKNFVT MNEYINDTNH YTNYQNEKES YIVTFNQYLE SLRLNTYVSL ARNTYWDASS 120
121 NVNYSLSLSR DFDIGPLKNV STSLTFSRIN WEED
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [545-654] |
1 11 21 31 41 51
| | | | | |
1 NQDQLYLNIS IPWGTSRTLS YGMQRNQDNE ISHTASWYDS SDRNNSWSVS ASGDNDEFKD 60
61 MKASLRASYQ HNTENGRLYL SGTSQRDSYY SLNASWNGSF TATRHGAAFH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [655-821] |
1 11 21 31 41 51
| | | | | |
1 DYSGSADSRF MIDADGTEDI PLNNKRAVTN RYGIGVIPSV SSYITTSLSV DTRNLPENVD 60
61 IENSVITTTL TEGAIGYAKL DTRKGYQIIG VIRLADGSHP PLGISVKDET SHKELGLVAD 120
121 GGFVYLNGIQ DDNKLALRWG DKSCFIQPPN SSNLTTGTAI LPCISQN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
