YRC Public Data Repository - Protein Structure Prediction

Protein:	YQAB_ECOLI
Organism:	Escherichia coli
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQAB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|20808387 - gi\|20808387\|ref\|NP_623558.1\| predicted phosphatase/phosphohexomutase [Thermoanaerobacter tengcongens... gi\|254479378, gi... - gi\|254479378\|ref\|ZP_05092713.1\| haloacid dehalogenase-like hydrolase, putative [Carboxydibrachium pa... gi\|20517000, gi\|... - gi\|20808387\|ref\|NP_623558.1\| phosphatase/phosphohexomutase [Thermoanaerobacter tengcongensis MB4], g...	161.0	[0..5]	[185..2]
gi\|56961873, gi\|... - gi\|56961873\|ref\|YP_173595.1\| hypothetical protein ABC0091 [Bacillus clausii KSM-K16], gi\|56908107\|db...	158.0	[0..6]	[185..2]
gi\|241884351, gi... - gi\|241903285\|ref\|ZP_04788011.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|242258243, gi... - gi\|242258243\|ref\|ZP_04803066.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|166853930, gi... - gi\|167039690\|ref\|YP_001662675.1\| HAD family hydrolase [Thermoanaerobacter sp. X514], gi\|166853930\|gb... gi\|76589066, gi\|... - gi\|76795752\|ref\|ZP_00778124.1\| HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hy...	157.0	[0..5]	[186..2]
gi\|255518257 - gi\|255518257\|ref\|ZP_05385933.1\| putative hydrolase [Clostridium difficile QCD-97b34] gi\|255651376 - gi\|255651376\|ref\|ZP_05398278.1\| putative hydrolase [Clostridium difficile QCD-37x79] gi\|254976461 - gi\|254976461\|ref\|ZP_05272933.1\| putative hydrolase [Clostridium difficile QCD-66c26] gi\|255093845 - gi\|255093845\|ref\|ZP_05323323.1\| putative hydrolase [Clostridium difficile CIP 107932] gi\|255315597 - gi\|255315597\|ref\|ZP_05357180.1\| putative hydrolase [Clostridium difficile QCD-76w55] gi\|145953352, gi... - gi\|90573404\|ref\|ZP_01229919.1\| hypothetical protein CdifQ_02003170 [Clostridium difficile QCD-32g58]...	155.0	[0..2]	[188..1]
gi\|255102031 - gi\|255102031\|ref\|ZP_05331008.1\| putative hydrolase [Clostridium difficile QCD-63q42] gi\|255307899 - gi\|255307899\|ref\|ZP_05352070.1\| putative hydrolase [Clostridium difficile ATCC 43255] gi\|126700473, gi... - gi\|126700473\|ref\|YP_001089370.1\| putative hydrolase [Clostridium difficile 630], gi\|115251910\|emb\|CA...	155.0	[0..2]	[188..1]
gi\|32034240 - gi\|32034240\|ref\|ZP_00134451.1\| COG0546: Predicted phosphatases [Actinobacillus pleuropneumoniae sero... gi\|126098145, gi... - gi\|126209353\|ref\|YP_001054578.1\| phosphoglycolate phosphatase [Actinobacillus pleuropneumoniae L20],...	155.0	[0..1]	[186..1]
gi\|55247209, gi\|... - gi\|57965748\|ref\|XP_561314.1\| ENSANGP00000026891 [Anopheles gambiae str. PEST], gi\|55247209\|gb\|EAL423...	154.0	[0..3]	[186..11]
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	154.0	[0..1]	[186..1]
gi\|57225248, gi\|... - gi\|57234800\|ref\|YP_181140.1\| glycoprotease family protein/hydrolase, beta-phosphoglucomutase family ...	154.0	[0..2]	[186..234]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	152.0	[0..1]	[186..1]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYERYAGLIF DMDGTILDTE PTHRKAWREV LGHYGLQYDI QAMIALNGSP TWRIAQAIIE  60
   61 LNQADLDPHA LAREKTEAVR SMLLDSVEPL PLVDVVKSWH GRRPMAVGTG SESAIAEALL 120
  121 AHLGLRHYFD AVVAADHVKH HKPAPDTFLL CAQRMGVQPT QCVVFEDADF GIQAARAAGM 180
  181 DAVDVRLL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.39794
Match:	2pibA
Description:	No description for 2pibA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits