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View Structure Prediction Details

Protein: YP03_PHOLL, Y250...
Organism: Photorhabdus luminescens subsp. laumondii
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YP03_PHOLL, Y250....

Description E-value Query
Range
Subject
Range
YCHJ_SHISS - UPF0225 protein YchJ OS=Shigella sonnei (strain Ss046) GN=ychJ PE=3 SV=1
YCHJ_SHIBS - UPF0225 protein YchJ OS=Shigella boydii serotype 4 (strain Sb227) GN=ychJ PE=3 SV=1
YCHJ_SHIB3 - UPF0225 protein YchJ OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ychJ PE=3 SV=1
YCHJ_ECOSE - UPF0225 protein YchJ OS=Escherichia coli (strain SE11) GN=ychJ PE=3 SV=1
YCHJ_ECO8A - UPF0225 protein YchJ OS=Escherichia coli O8 (strain IAI1) GN=ychJ PE=3 SV=1
YCHJ_ECOBW - UPF0225 protein YchJ OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=ychJ PE=3 SV=1
YCHJ_ECO55 - UPF0225 protein YchJ OS=Escherichia coli (strain 55989 / EAEC) GN=ychJ PE=3 SV=1
EG12119 - UPF0225 family protein / UPF0225 family protein, function unknown,
YCHJ_ECODH - UPF0225 protein YchJ OS=Escherichia coli (strain K12 / DH10B) GN=ychJ PE=3 SV=1
YCHJ_ECOLI - UPF0225 protein ychJ - Escherichia coli
EG12119 - UPF0225 family protein / UPF0225 family protein, function unknown,
gi|4062802, gi|8... - gi|89108079|ref|AP_001859.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110], gi|406...
170.0 [0..1] [159..1]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELCPCGSG IDFADCCSPY LQNIKFAQTA ESLMRSRYSA YVKHNADYLI TSWHPDCQAE  60
   61 KWRLDIEQSF IVTQWLGLNV ITTEKGENDN EAYVEFSACF LDQKSQDKQL IHERSRFLRI 120
  121 DQHWYYIDGV KPIDGIKPQI GRNSPCPCGS GKKYKKCCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.154902
Match: 2i9wA
Description: No description for 2i9wA was found.

Predicted functions:

Term Confidence Notes
binding 0.244245144085682 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle