| Protein: | Y2355_VIBCH, YN5... |
| Organism: | Vibrio cholerae |
| Length: | 257 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2355_VIBCH, YN5....
| Description | E-value | Query Range |
Subject Range |
|
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402.0 | [0..1] | [257..27] |
|
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400.0 | [0..1] | [257..1] |
|
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399.0 | [0..1] | [257..1] |
|
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399.0 | [0..1] | [257..1] |
|
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397.0 | [0..1] | [257..1] |
|
|
397.0 | [0..1] | [257..1] |
|
|
395.0 | [0..1] | [257..1] |
|
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394.0 | [0..1] | [257..1] |
|
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392.0 | [0..1] | [257..1] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MLIVVSPAKT LDYESPVSTS NFTQPELTAH SAELIQVCRT LSSQDVSELM SVSDKIAGLN 60
61 VARFAQWSET F
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.715 | a.4.1 | Homeodomain-like |
| View | Download | 0.597 | a.4.1 | Homeodomain-like |
| View | Download | 0.526 | a.4.1 | Homeodomain-like |
| View | Download | 0.501 | a.4.1 | Homeodomain-like |
| View | Download | 0.466 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.404 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.394 | a.4.1 | Homeodomain-like |
| View | Download | 0.383 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.358 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.356 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
|
Region A: Residues: [72-146] |
1 11 21 31 41 51
| | | | | |
1 TLDNARQAIF AFKGDVYTGL EAETLSPQDL DFAQQHLRML SGLYGVLRPL DLMQPYRLEM 60
61 GTKLANARGA NLYQF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.857 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.744 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.667 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.661 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.647 | N/A | N/A | a.8.11 | Description not found. |
| View | Download | 0.638 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.476 | N/A | N/A | a.47.2 | t-snare proteins |
|
Region A: Residues: [147-257] |
1 11 21 31 41 51
| | | | | |
1 WGDIITEKLN QAIEAQGDNV LVNLASNEYF KAVNPKRLNA QIVTPIFKDA KNGQYKIISF 60
61 FAKKARGMMA RYIIENRIKS VKDLEGFNTA GYYFVASEST PTELVFKREE Q
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.932 | N/A | N/A | d.360.1 | Description not found. |
| View | Download | 0.789 | N/A | N/A | d.360.1 | Description not found. |
| View | Download | 0.781 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.635 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.619 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.607 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.560 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.541 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.525 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.486 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
