YRC Public Data Repository - Protein Structure Prediction

Protein:	YIGL_ECOLI
Organism:	Escherichia coli
Length:	266 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIGL_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|117626085, gi... - gi\|117626085\|ref\|YP_859408.1\| putative sugar phosphatase [Escherichia coli APEC O1], gi\|115515209\|gb...	214.0	[0..1]	[266..40]
gi\|15804418, gi\|... - gi\|15804418\|ref\|NP_290458.1\| putative sugar phosphatase [Escherichia coli O157:H7 EDL933], gi\|125187... gi\|25325555, gi\|... - gi\|25325555\|pir\|\|B86070 hypothetical protein Z5347 [imported] - Escherichia coli (strain O157:H7, s...	212.0	[0..1]	[266..40]
gi\|91213352, gi\|... - gi\|91213352\|ref\|YP_543338.1\| putative sugar phosphatase [Escherichia coli UTI89], gi\|91074926\|gb\|ABE...	210.0	[0..1]	[266..22]
gi\|49613614, gi\|... - gi\|50123088\|ref\|YP_052255.1\| putative sugar phosphatase [Pectobacterium atrosepticum SCRI1043], gi\|4...	210.0	[0..1]	[265..1]
gi\|26250567, gi\|... - gi\|26250567\|ref\|NP_756607.1\| putative sugar phosphatase [Escherichia coli CFT073], gi\|26110997\|gb\|AA...	210.0	[0..1]	[266..22]
gi\|170683030, gi... - gi\|170683030\|ref\|YP_001746144.1\| Cof family hydrolase [Escherichia coli SMS-3-5], gi\|170520748\|gb\|AC... gi\|110345743, gi... - gi\|110644151\|ref\|YP_671881.1\| putative sugar phosphatase [Escherichia coli 536], gi\|110345743\|gb\|ABG... gi\|190905782, gi... - gi\|75237658\|ref\|ZP_00721678.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col...	210.0	[0..1]	[266..1]
gi\|75512618, gi\|... - gi\|75512618\|ref\|ZP_00735130.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|75230787, gi\|... - gi\|75230787\|ref\|ZP_00717250.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|218358489, gi... - gi\|218550948\|ref\|YP_002384739.1\| putative sugar phosphatase [Escherichia fergusonii ATCC 35469], gi\|... gi\|218697547, gi... - gi\|218697547\|ref\|YP_002405214.1\| putative sugar phosphatase [Escherichia coli 55989], gi\|218354279\|e... gi\|170022152, gi... - gi\|170022152\|ref\|YP_001727106.1\| putative sugar phosphatase [Escherichia coli ATCC 8739], gi\|1697570... gi\|124499203, gi... - gi\|124530437\|ref\|ZP_01701095.1\| Cof-like hydrolase [Escherichia coli B], gi\|124499203\|gb\|EAY46696.1\|... gi\|218434556, gi... - gi\|218707459\|ref\|YP_002414978.1\| putative sugar phosphatase [Escherichia coli UMN026], gi\|218434556\|...	209.0	[0..1]	[266..1]
gi\|218367658, gi... - gi\|218560889\|ref\|YP_002393802.1\| putative sugar phosphatase [Escherichia coli S88], gi\|218367658\|emb... gi\|170769871, gi... - gi\|170769871\|ref\|ZP_02904324.1\| hydrolase, Cof family [Escherichia albertii TW07627], gi\|170121309\|g... gi\|253979828, gi... - gi\|254290521\|ref\|YP_003056269.1\| predicted hydrolase [Escherichia coli BL21(DE3)], gi\|253979828\|gb\|A... gi\|242379358, gi... - gi\|251787085\|ref\|YP_003001389.1\| hypothetical protein B21_03654 [Escherichia coli BL21], gi\|24237935... gi\|254163771, gi... - gi\|254163771\|ref\|YP_003046879.1\| predicted hydrolase [Escherichia coli B str. REL606], gi\|253975672\|... gi\|194422419, gi... - gi\|83585927\|ref\|ZP_00924566.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|218371467, gi... - gi\|218701481\|ref\|YP_002409110.1\| putative sugar phosphatase [Escherichia coli IAI39], gi\|218371467\|e...	209.0	[0..1]	[266..1]
gi\|110807482, gi... - gi\|110807482\|ref\|YP_691002.1\| putative sugar phosphatase [Shigella flexneri 5 str. 8401], gi\|1106170...	209.0	[0..1]	[266..22]
gi\|209398986, gi... - gi\|209398986\|ref\|YP_002273345.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4115], gi\|20... gi\|209914564, gi... - gi\|209921305\|ref\|YP_002295389.1\| putative sugar phosphatase [Escherichia coli SE11], gi\|209914564\|db... gi\|254595224, gi... - gi\|254795824\|ref\|YP_003080661.1\| predicted hydrolase [Escherichia coli O157:H7 str. TW14359], gi\|254... gi\|168786669, gi... - gi\|189373426\|gb\|EDU91842.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC869], gi\|16878666... gi\|189376696, gi... - gi\|189376696\|gb\|EDU95112.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC508], gi\|16880110... gi\|187768836, gi... - gi\|187768836\|gb\|EDU32680.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4196], gi\|1687756... gi\|189001597, gi... - gi\|189001597\|gb\|EDU70583.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4076], gi\|1687807... gi\|75209547, gi\|... - gi\|75209547\|ref\|ZP_00709768.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|208812534, gi... - gi\|208812534\|ref\|ZP_03253863.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4045], gi\|208... gi\|192958666, gi... - gi\|75238276\|ref\|ZP_00722275.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|208738774, gi... - gi\|208818651\|ref\|ZP_03258971.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4042], gi\|208... gi\|187733143, gi... - gi\|75177789\|ref\|ZP_00697854.1\| COG0561: Predicted hydrolases of the HAD superfamily [Shigella boydii... gi\|195938118 - gi\|195938118\|ref\|ZP_03083500.1\| putative sugar phosphatase [Escherichia coli O157:H7 str. EC4024] gi\|157155533, gi... - gi\|75188568\|ref\|ZP_00701835.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|208808391, gi... - gi\|208808391\|ref\|ZP_03250728.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4206], gi\|208... gi\|192926648, gi... - gi\|75256250\|ref\|ZP_00727928.1\| COG0561: Predicted hydrolases of the HAD superfamily [Escherichia col... gi\|81247588, gi\|... - gi\|82546177\|ref\|YP_410124.1\| putative sugar phosphatase [Shigella boydii Sb227], gi\|81247588\|gb\|ABB6... gi\|189359294, gi... - gi\|189359294\|gb\|EDU77713.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4401], gi\|1687537... gi\|189362678, gi... - gi\|189362678\|gb\|EDU81097.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4486], gi\|1687681... gi\|168750357, gi... - gi\|188015416\|gb\|EDU53538.1\| hydrolase, Cof family [Escherichia coli O157:H7 str. EC4113], gi\|1687503...	208.0	[0..1]	[266..1]

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Predicted Domain #1

Region A:
Residues: [1-266]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQVVASDLD GTLLSPDHTL SPYAKETLKL LTARGINFVF ATGRHHVDVG QIRDNLEIKS  60
   61 YMITSNGARV HDLDGNLIFA HNLDRDIASD LFGVVNDNPD IITNVYRDDE WFMNRHRPEE 120
  121 MRFFKEAVFQ YALYEPGLLE PEGVSKVFFT CDSHEQLLPL EQAINARWGD RVNVSFSTLT 180
  181 CLEVMAGGVS KGHALEAVAK KLGYSLKDCI AFGDGMNDAE MLSMAGKGCI MGSAHQRLKD 240
  241 LHPELEVIGT NADDAVPHYL RKLYLS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.69897
Match:	1rkqA
Description:	Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.55296860681783	bayes_pls_golite062009
hydrolase activity	0.82377518695623	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: