| Protein: | YH70_SYNY3, Y177... |
| Organism: | Synechocystis sp. PCC 6803 |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YH70_SYNY3, Y177....
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..1] | [585..1] |
|
|
398.0 | [0..2] | [582..10] |
|
|
385.0 | [0..28] | [565..18] |
|
|
385.0 | [0..28] | [555..34] |
|
|
383.0 | [0..22] | [584..4] |
|
|
382.0 | [0..28] | [555..23] |
|
|
378.0 | [0..5] | [585..26] |
|
|
361.0 | [0..43] | [584..38] |
|
|
354.0 | [0..42] | [577..6] |
|
|
352.0 | [0..42] | [577..6] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSALSTKLEP TNSYSESLPP QRRSPLEAEG RYRWNRGNYS ITRRRIDIWG FVLTLLYQFW 60
61 LNGKKWSYAG GYTEEKLQQR RRRQAKWIRE NLLSLGPTFI KVGQLFSTRS DL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.747 | a.7.12 | Description not found. |
| View | Download | 0.593 | a.246.1 | Description not found. |
| View | Download | 0.541 | a.47.2 | t-snare proteins |
| View | Download | 0.522 | a.29.13 | Description not found. |
| View | Download | 0.508 | a.47.2 | t-snare proteins |
| View | Download | 0.473 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.461 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.401 | a.47.2 | t-snare proteins |
| View | Download | 0.399 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.378 | a.2.7 | tRNA-binding arm |
|
Region A: Residues: [113-506] |
1 11 21 31 41 51
| | | | | |
1 FPAEYVEELS KLQDEVPAFS YEQAAGIIEE ELGKPIAKLY RSFDPVPLAA ASLGQVHKAQ 60
61 LHTGEDVVVK VQRPGLKKLF TIDLAILKKI AQYFQNHPKW GRGRDWNGIY EECCKILWQE 120
121 TDYLREGRSA DTFRRNFRGE DWVKVPRVYW RYTSTQILTL EYLPGIKISH YDALEAAGLE 180
181 RKELAQLGAR AYLFQLLNHG FFHADPHPGN LAVSPEAGEL IFYDFGMMGE ITPDTKNKLM 240
241 DTLFGVAEKN AERIVNSLVA LGALKETEDM GPIRRSVQFL LDNFMDKPFE EQSITKISDD 300
301 LYEIAYDQPF RFPATFTFVM RAFSTLEGVG KGLDPDFNFM AVAQPFALQI MNNSNGFNPA 360
361 GNIMDELGRQ AVQVGNSALG LPRRIEDSLD RLDR
|
| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 1omwA |
| Description: | G-protein coupled receptor kinase 2, N-terminal domain; G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1); G-protein coupled receptor kinase 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [507-585] |
1 11 21 31 41 51
| | | | | |
1 GDIRVRVRST ETDRLLRRMG TMQMGTNYVL FTCALVLSAT LLFVNNYFMA AAVVLLMSLV 60
61 PAFALWRLLK RLERQDRMF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
