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View Structure Prediction Details

Protein: YGEI_ECOLI
Organism: Escherichia coli
Length: 72 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGEI_ECOLI.

Description E-value Query
Range
Subject
Range
gi|189369213, gi... - gi|189369213|gb|EDU87629.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501], g...
gi|168753774, gi... - gi|189358447|gb|EDU76866.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401], g...
gi|168747686, gi... - gi|188017857|gb|EDU55979.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113], g...
gi|15832964, gi|... - gi|15832964|ref|NP_311737.1| hypothetical protein ECs3710 [Escherichia coli O157:H7 str. Sakai], gi|...
gi|217327407, gi... - gi|217327407|ref|ZP_03443490.1| conserved hypothetical protein [Escherichia coli O157:H7 str. TW1458...
gi|209160070, gi... - gi|209398670|ref|YP_002272318.1| hypothetical protein ECH74115_4124 [Escherichia coli O157:H7 str. E...
gi|189374007, gi... - gi|189374007|gb|EDU92423.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869], gi...
gi|189003304, gi... - gi|189003304|gb|EDU72290.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076], g...
gi|15832964, gi|... - gi|15832964|ref|NP_311737.1| hypothetical protein ECs3710 [Escherichia coli O157:H7], gi|13363182|db...
gi|168775713, gi... - gi|187768735|gb|EDU32579.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196], g...
gi|25496459, gi|... - pir||B85938 hypothetical protein Z4174 [imported] - Escherichia coli (strain O157:H7, substrain EDL...
gi|189363609, gi... - gi|189363609|gb|EDU82028.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486], g...
gi|254594193, gi... - gi|254794793|ref|YP_003079630.1| hypothetical protein ECSP_3807 [Escherichia coli O157:H7 str. TW143...
gi|208733189, gi... - gi|208811912|ref|ZP_03253241.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4045...
gi|15803374, gi|... - gi|15803374|ref|NP_289407.1| hypothetical protein Z4174 [Escherichia coli O157:H7 EDL933], gi|125173...
gi|208725903, gi... - gi|208806102|ref|ZP_03248439.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4206...
gi|195936458 - gi|195936458|ref|ZP_03081840.1| hypothetical protein EscherichcoliO157_08332 [Escherichia coli O157:...
gi|168799969, gi... - gi|189377660|gb|EDU96076.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508], gi...
120.0 [0..1] [72..1]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPIGINNL SQSSNIANAT GDEVVSLDKH INTSATDTDQ IQAFIVSTWM APFQNDMYSE  60
   61 DNPISPYYKI EW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.615 a.239.1 Description not found.
View Download 0.551 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.551 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.472 a.4.1 Homeodomain-like
View Download 0.459 a.112.1 Description not found.
View Download 0.459 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.456 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.456 a.112.1 Description not found.
View Download 0.384 a.16.1 S15/NS1 RNA-binding domain
View Download 0.378 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.295 a.126.1 Serum albumin-like
View Download 0.259 a.4.1 Homeodomain-like
View Download 0.256 a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.212 a.126.1 Serum albumin-like
View Download 0.211 a.4.1 Homeodomain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle