| Protein: | YFGM_ECOLI |
| Organism: | Escherichia coli |
| Length: | 206 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFGM_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
148.0 | [0..8] | [204..24] |
|
|
146.0 | [0..8] | [204..334] |
|
|
145.0 | [0..11] | [205..289] |
|
|
145.0 | [0..8] | [200..58] |
|
|
144.0 | [0..8] | [204..177] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MEIYENENDQ VEAVKRFFAE NGKALAVGVI LGVGALIGWR YWNSHQVDSA RSASLAYQNA 60
61 VTAVSEGKPD SIPAAEKFAA ENKNTYGALA SLELAQQFVD KNELEKAAAQ LQQGLADTSD 120
121 ENLKAVINLR LARVQVQLKQ ADAALKTLDT IKGEGWAAIV ADLRGEALLS KGDKQGARSA 180
181 WEAGVKSDVT PALSEMMQMK INNLSI
|
| Detection Method: |  |
| Confidence: | 23.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.439878494078852 | bayes_pls_golite062009 |
| protein binding | 0.164436493568669 | bayes_pls_golite062009 |
