YRC Public Data Repository - Protein Structure Prediction

Protein:	YFCQ_ECOLI
Organism:	Escherichia coli
Length:	162 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFCQ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|81241892, gi\|... - gi\|82777744\|ref\|YP_404093.1\| hypothetical protein SDY_2533 [Shigella dysenteriae Sd197], gi\|81241892...	138.0	[0..1]	[162..1]
gi\|91073205, gi\|... - gi\|91211631\|ref\|YP_541617.1\| putative Yfc fimbriae subunit YfcQ precursor [Escherichia coli UTI89], ... gi\|218366016, gi... - gi\|218559247\|ref\|YP_002392160.1\| putative fimbrial-like adhesin exported protein [Escherichia coli S... gi\|117624523, gi... - gi\|117624523\|ref\|YP_853436.1\| putative Yfc fimbriae subunit YfcQ precursor [Escherichia coli APEC O1... gi\|226901180, gi... - gi\|237704814\|ref\|ZP_04535295.1\| conserved hypothetical protein [Escherichia sp. 3_2_53FAA], gi\|22690...	130.0	[0..1]	[162..1]
gi\|26248722, gi\|... - gi\|26248722\|ref\|NP_754762.1\| fimbrial-like protein yfcQ precursor [Escherichia coli CFT073], gi\|2610... gi\|227887394, gi... - gi\|227887394\|ref\|ZP_04005199.1\| fimbrial family protein yfcQ precursor [Escherichia coli 83972], gi\|... gi\|75235759, gi\|... - gi\|75235759\|ref\|ZP_00719916.1\| hypothetical protein EcolF_01004466 [Escherichia coli F11], gi\|191174... gi\|47600719 - gi\|47600719\|emb\|CAE55840.1\| hypothetical fimbrial-like protein YfcQ precusor [Escherichia coli Nissl... gi\|47600719 - gi\|47600719\|emb\|CAE55840.1\| hypothetical fimbrial-like protein YfcQ precusor [Escherichia coli Nissl... gi\|110344130, gi... - gi\|110642538\|ref\|YP_670268.1\| fimbrial-like protein YfcQ precursor [Escherichia coli 536], gi\|110344...	129.0	[0..1]	[162..1]
gi\|157079938, gi... - gi\|75187116\|ref\|ZP_00700383.1\| hypothetical protein EcolE_01000342 [Escherichia coli E24377A], gi\|15...	127.0	[0..1]	[162..1]
gi\|16132136, gi\|... - gb\|AAC77271.1\| fimbrial protein; fimbrial protein, internal segment [Escherichia coli K12], gi\|1613... gi\|537156\|gb\|AAA... - fimI [Escherichia coli] gi\|537156, gi\|13... - gi\|537156\|gb\|AAA97211.1\| fimI [Escherichia coli], pir\|\|S56540 fimI protein - Escherichia coli (strai...	122.0	[0..1]	[162..37]
gi\|83588356 - gi\|83588356\|ref\|ZP_00926981.1\| hypothetical protein Ecol1_01000744 [Escherichia coli 101-1] gi\|253974244, gi... - gi\|254162343\|ref\|YP_003045451.1\| predicted fimbrial-like adhesin protein [Escherichia coli B str. RE... gi\|254289104, gi... - gi\|254289104\|ref\|YP_003054852.1\| predicted fimbrial-like adhesin protein [Escherichia coli BL21(DE3)... gi\|242377967, gi... - gi\|251785694\|ref\|YP_002999998.1\| hypothetical protein B21_02219 [Escherichia coli BL21], gi\|24237796...	122.0	[0..1]	[162..1]
gi\|117626623, gi... - gi\|117626623\|ref\|YP_859946.1\| FimI fimbrial protein [Escherichia coli APEC O1], gi\|115515747\|gb\|ABJ0...	121.0	[0..1]	[162..42]
gi\|209749352, gi... - pir\|\|B91288 fimbrial protein [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952),... gi\|15834528, gi\|... - gi\|15834528\|ref\|NP_313301.1\| FimI [Escherichia coli O157:H7], gi\|13364752\|dbj\|BAB38697.1\| fimbrial p... gi\|15834528, gi\|... - gi\|15834528\|ref\|NP_313301.1\| FimI [Escherichia coli O157:H7 str. Sakai], gi\|13364752\|dbj\|BAB38697.1\|...	121.0	[0..1]	[162..37]

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Predicted Domain #1

Region A:
Residues: [1-162]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKTFLTLLC VSSAIAHAAD EDITFHGTLL SPPTCSISGG KTIEVEFRDL IIDDINGNYG  60
   61 RKEVPYELTC DSTTRHPDWE MTLTWTGTQT SFNDAAIETD VPGFGIELQH DGQRFKLNTP 120
  121 LAINATDFTQ KPKLEAVPVK ASDAVLSDTN FSAYATLRVD YQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.045757
Match:	2uy6B
Description:	No description for 2uy6B was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits