YRC Public Data Repository - Protein Structure Prediction

Protein:	YEGU_ECOLI
Organism:	Escherichia coli
Length:	334 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEGU_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|194424893, gi... - gi\|83588084\|ref\|ZP_00926709.1\| COG1397: ADP-ribosylglycohydrolase [Escherichia coli 101-1], gi\|19443... gi\|242377746, gi... - gi\|251785473\|ref\|YP_002999777.1\| hypothetical protein B21_01991 [Escherichia coli BL21], gi\|24237774... gi\|253974013, gi... - gi\|254162112\|ref\|YP_003045220.1\| predicted hydrolase [Escherichia coli B str. REL606], gi\|253974013\|... gi\|254288874, gi... - gi\|254288874\|ref\|YP_003054622.1\| predicted hydrolase [Escherichia coli BL21(DE3)], gi\|253978181\|gb\|A...	275.0	[0..1]	[334..1]
gi\|81244877, gi\|... - gi\|82543466\|ref\|YP_407413.1\| hypothetical protein SBO_0920 [Shigella boydii Sb227], gi\|81244877\|gb\|A...	275.0	[0..1]	[334..1]
gi\|157158412, gi... - gi\|75186890\|ref\|ZP_00700157.1\| COG1397: ADP-ribosylglycohydrolase [Escherichia coli E24377A], gi\|157...	274.0	[0..1]	[334..1]
gi\|187734052, gi... - gi\|75177212\|ref\|ZP_00697310.1\| COG1397: ADP-ribosylglycohydrolase [Shigella boydii BS512], gi\|187734...	273.0	[0..1]	[334..1]
gi\|237704558, gi... - gi\|237704558\|ref\|ZP_04535039.1\| conserved hypothetical protein [Escherichia sp. 3_2_53FAA], gi\|22690... gi\|218365787, gi... - gi\|218559018\|ref\|YP_002391931.1\| putative (phospho)hydrolase [Escherichia coli S88], gi\|218365787\|em... gi\|110642307, gi... - gi\|110642307\|ref\|YP_670037.1\| hypothetical protein ECP_2137 [Escherichia coli 536], gi\|110343899\|gb\|... gi\|190909459, gi... - gi\|75242917\|ref\|ZP_00726623.1\| COG1397: ADP-ribosylglycohydrolase [Escherichia coli F11], gi\|1911699... gi\|115513430, gi... - gi\|117624306\|ref\|YP_853219.1\| putative hydrolase [Escherichia coli APEC O1], gi\|115513430\|gb\|ABJ0150... gi\|91211386, gi\|... - gi\|91211386\|ref\|YP_541372.1\| hypothetical protein UTI89_C2373 [Escherichia coli UTI89], gi\|91072960\|...	273.0	[0..1]	[334..1]
gi\|75196147, gi\|... - gi\|75196147\|ref\|ZP_00706217.1\| COG1397: ADP-ribosylglycohydrolase [Escherichia coli HS], gi\|15716158...	273.0	[0..1]	[334..1]
gi\|26248474, gi\|... - gi\|26248474\|ref\|NP_754514.1\| hypothetical protein c2626 [Escherichia coli CFT073], gi\|26108879\|gb\|AA...	271.0	[0..1]	[334..1]
gi\|81241639, gi\|... - gi\|82777491\|ref\|YP_403840.1\| hypothetical protein SDY_2272 [Shigella dysenteriae Sd197], gi\|81241639...	269.0	[0..1]	[334..1]
gi\|254793922, gi... - gi\|254793922\|ref\|YP_003078759.1\| predicted hydrolase [Escherichia coli O157:H7 str. TW14359], gi\|254... gi\|13362371, gi\|... - gi\|15832156\|ref\|NP_310929.1\| hypothetical protein ECs2902 [Escherichia coli O157:H7], gi\|13362371\|db... gi\|209747856, gi... - pir\|\|H85836 hypothetical protein Z3262 [imported] - Escherichia coli (strain O157:H7, substrain EDL... gi\|208739944, gi... - gi\|208819821\|ref\|ZP_03260141.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 s... gi\|15802574, gi\|... - gi\|15802574\|ref\|NP_288601.1\| hypothetical protein Z3262 [Escherichia coli O157:H7 EDL933], gi\|125163... gi\|208812867, gi... - gi\|208812867\|ref\|ZP_03254196.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 s... gi\|208808076, gi... - gi\|208808076\|ref\|ZP_03250413.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 s... gi\|195937868 - gi\|195937868\|ref\|ZP_03083250.1\| hypothetical protein EscherichcoliO157_15726 [Escherichia coli O157:... gi\|13362371, gi\|... - gi\|15832156\|ref\|NP_310929.1\| hypothetical protein ECs2902 [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|217329614, gi... - gi\|217329614\|ref\|ZP_03445693.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 s... gi\|209395786, gi... - gi\|209395786\|ref\|YP_002271378.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 ... gi\|168770074, gi... - gi\|189360996\|gb\|EDU79415.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|168761841, gi... - gi\|189367758\|gb\|EDU86174.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|189356471, gi... - gi\|189356471\|gb\|EDU74890.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|188015666, gi... - gi\|188015666\|gb\|EDU53788.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|168798974, gi... - gi\|189378528\|gb\|EDU96944.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|168789063, gi... - gi\|189371271\|gb\|EDU89687.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|168782428, gi... - gi\|189000194\|gb\|EDU69180.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ... gi\|168775949, gi... - gi\|187768615\|gb\|EDU32459.1\| ADP-ribosylglycohydrolase family protein [Escherichia coli O157:H7 str. ...	269.0	[0..1]	[333..1]
gi\|83571162, gi\|... - gi\|83571162\|ref\|ZP_00922603.1\| COG1397: ADP-ribosylglycohydrolase [Shigella dysenteriae 1012], gi\|19...	268.0	[0..1]	[334..1]

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Predicted Domain #1

Region A:
Residues: [1-334]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTERILGAL YGQALGDAMG MPSELWPRSR VKAHFGWIDR FLPGPKENNA ACYFNRAEFT  60
   61 DDTSMALCLA DALLEREGKI DPDLIGRNIL DWALRFDAFN KNVLGPTSKI ALNAIRDGKP 120
  121 VAELENNGVT NGAAMRVSPL GCLLPARDVD SFIDDVALAS SPTHKSDLAV AGAVVIAWAI 180
  181 SRAIDGESWS AIVDSLPSIA RHAQQKRITT FSASLAARLE IALKIVRNAD GTESASEQLY 240
  241 QVVGAGTSTI ESVPCAIALV ELAQTDPNRC AVLCANLGGD TDTIGAMATA ICGALHGVNA 300
  301 IDPALKAELD AVNQLDFNRY ATALAKYRQQ REAV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.221849
Match:	1t5jA
Description:	Crystal structure of Hypothetical protein MJ1187 from Methanococcus jannaschii
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits