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View Structure Prediction Details

Protein: Y198_PHOLL, NFUA...
Organism: Photorhabdus luminescens subsp. laumondii
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y198_PHOLL, NFUA....

Description E-value Query
Range
Subject
Range
gi|238792866, gi... - gi|77978690|ref|ZP_00834116.1| COG0316: Uncharacterized conserved protein [Yersinia intermedia ATCC ...
202.0 [0..1] [191..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINITEAAQT HFAKLLANQE PGTQIRVFVI NPGTPTAECG VSYCPPDAVE ATDTELKFDQ  60
   61 LSAYVDELSA PFLEEAEIDF VTDQLGSQLT LKAPNAKMRK VSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.09691
Match: 1r94A
Description: Crystal Structure of IscA (MERCURY DERIVATIVE)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
2 iron, 2 sulfur cluster binding 1.71468673917586 bayes_pls_golite062009
iron-sulfur cluster binding 1.33125375529348 bayes_pls_golite062009
metal cluster binding 1.33125375529348 bayes_pls_golite062009
binding 0.700615110946341 bayes_pls_golite062009
protein binding 0.15305983062661 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [104-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSPLAERVEY VLQSQINPQL AGHGGRVSLM EITDDGFAIL QFGGGCNGCS MVDVTLKEGI  60
   61 EKELLNMFPE LKGVKDLTEH QRGEHSYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.39794
Match: 1vehA
Description: Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.788558668229677 bayes_pls_golite062009
2 iron, 2 sulfur cluster binding 0.233615476766167 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle