YRC Public Data Repository - Protein Structure Prediction

Protein:	WECF_ECOLI
Organism:	Escherichia coli
Length:	359 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WECF_ECOLI.

Description	E-value	Query Range	Subject Range
WECF_SHISS - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Shigella sonnei (strain Ss046) GN=... WECF_SHIB3 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Shigella boydii serotype 18 (strai...	676.0	[0..1]	[359..1]
gi\|188493818, gi... - gi\|75512647\|ref\|ZP_00735159.1\| hypothetical protein Ecol5_01003217 [Escherichia coli 53638], gi\|1884... gi\|226838697, gi... - gi\|254039006\|ref\|ZP_04873057.1\| TDP-Fuc4NAc:lipid II Fuc4Nac transferase [Escherichia sp. 1_1_43], g...	676.0	[0..1]	[359..1]
WECF_ECO55 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Escherichia coli (strain 55989 / E... WECF_ECO24 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Escherichia coli O139:H28 (strain ...	674.0	[0..1]	[359..1]
WECF_SHIBS - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Shigella boydii serotype 4 (strain...	674.0	[0..1]	[359..1]
gi\|75236370, gi\|... - gi\|75236370\|ref\|ZP_00720470.1\| hypothetical protein EcolF_01004273 [Escherichia coli F11], gi\|191174... WECF_ECOL5 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Escherichia coli O6:K15:H31 (strai...	673.0	[0..1]	[359..1]
gi\|24115087, gi\|... - gi\|24115087\|ref\|NP_709597.1\| 4-alpha-L-fucosyltransferase [Shigella flexneri 2a str. 301], gi\|240543... gi\|30064912, gi\|... - gi\|30064912\|ref\|NP_839083.1\| 4-alpha-L-fucosyltransferase [Shigella flexneri 2a str. 2457T], gi\|3004... WECF_SHIFL - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Shigella flexneri GN=wecF PE=3 SV=... WECF_SHIF8 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Shigella flexneri serotype 5b (str...	673.0	[0..1]	[359..1]
gi\|194417130, gi... - gi\|83569028\|ref\|ZP_00920490.1\| hypothetical protein Sdys1_01002696 [Shigella dysenteriae 1012], gi\|1...	673.0	[0..1]	[359..1]
WECF_ECOHS - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase OS=Escherichia coli O9:H4 (strain HS)...	672.0	[0..1]	[359..1]
gi\|254163737, gi... - gi\|254163737\|ref\|YP_003046845.1\| 4-alpha-L-fucosyltransferase [Escherichia coli B str. REL606], gi\|2... gi\|194438585, gi... - gi\|83585955\|ref\|ZP_00924594.1\| hypothetical protein Ecol1_01002881 [Escherichia coli 101-1], gi\|1944... gi\|253775581, gi... - gi\|254290487\|ref\|YP_003056235.1\| 4-alpha-L-fucosyltransferase [Escherichia coli BL21(DE3)], gi\|25397... gi\|251787053, gi... - gi\|251787053\|ref\|YP_003001357.1\| hypothetical protein B21_03620 [Escherichia coli BL21], gi\|24237932...	672.0	[0..1]	[359..1]
gi\|192955649, gi... - gi\|75234087\|ref\|ZP_00718500.1\| hypothetical protein EcolE1_01003987 [Escherichia coli E110019], gi\|1...	672.0	[0..1]	[359..1]

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Predicted Domain #1

Region A:
Residues: [1-359]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLIHVLGS DIPHHNRTVL RFFNDALAAT SEHAREFMVV GKDDGLSDSC PALSVQFFPG  60
   61 KKSLAEAVIA KAKANRQQRF FFHGQFNPTL WLALLSGGIK PSQFFWHIWG ADLYELSSGL 120
  121 RYKLFYPLRR LAQKRVGCVF ATRGDLSFFA KTHPKVRGEL LFFPTRMDPS LNTMANDRQR 180
  181 EGKMTILVGN SGDRSNEHIA ALRAVHQQFG DTVKVVVPMG YPPNNEAYIE EVRQAGLELF 240
  241 SEENLQILSE KLEFDAYLAL LRQCDLGYFI FARQQGIGTL CLLIQAGIPC VLNRENPFWQ 300
  301 DMTEQHLPVL FTTDDLNEDI VREAQRQLAS VDKNTIAFFS PNYLQGWQRA LAIAAREVA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.15
Match:	2gejA
Description:	No description for 2gejA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits