| Protein: | VIRB6_AGRFC |
| Organism: | Agrobacterium tumefaciens str. C58 |
| Length: | 295 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VIRB6_AGRFC.
| Description | E-value | Query Range |
Subject Range |
|
|
181.0 | [0..1] | [290..558] |
|
|
181.0 | [0..1] | [295..40] |
|
|
181.0 | [0..1] | [290..558] |
|
|
179.0 | [0..1] | [295..1] |
|
|
178.0 | [0..1] | [295..1] |
|
|
178.0 | [0..1] | [295..1] |
|
|
171.0 | [0..1] | [291..547] |
|
|
169.0 | [0..10] | [286..43] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MNFTIPAPFT AIHTIFDLAF TTSLDTMLGT IQEAVSAPLV ACVTLWIIVQ GILVMRGEID 60
61 TRGGITRVIT VTVVVALVVG QANY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [85-138] |
1 11 21 31 41 51
| | | | | |
1 HDYVVSVFEE TIPNFIQQFS GSGLPLQTIP AQLDTMFALT QAAFQRIASE IGPM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.907 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.854 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.787 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.785 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.764 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.757 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.747 | a.4.1 | Homeodomain-like |
| View | Download | 0.719 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.651 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.628 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [139-295] |
1 11 21 31 41 51
| | | | | |
1 NDQDILAFQG AQWVFYGTLW SAFGIYDAVG ILTKVLLAIG PLILTGYIFD RTRDIAAKWI 60
61 GQLITYGLLL LLLNLVATIV ILTEATALTL MLGVITLAGT TAAKIIGLYE LDMFFLTGDA 120
121 LIVALPAIAG NIGGSYWSGA TQSANSLYRR FAQVDRR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
