YRC Public Data Repository - Protein Structure Prediction

Protein:	QCR9_SOLTU
Organism:	Solanum tuberosum
Length:	72 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QCR9_SOLTU.

Description	E-value	Query Range	Subject Range
QCR9_MOUSE - Cytochrome b-c1 complex subunit 9 OS=Mus musculus GN=Uqcr10 PE=1 SV=1	108.0	[0..12]	[70..6]
QCR9_BOVIN - Cytochrome b-c1 complex subunit 9 OS=Bos taurus GN=UQCR10 PE=1 SV=3	105.0	[0..12]	[70..6]
gi\|116182520, gi... - gi\|88186185\|gb\|EAQ93653.1\| predicted protein [Chaetomium globosum CBS 148.51], gi\|116182520\|ref\|XP_0...	105.0	[0..5]	[72..16]
gi\|92867670 - gi\|92867670\|gb\|ABE77853.1\| Ubiquinol-cytochrome C reductase, UQCRXQCR9 like [Medicago truncatula]	104.0	[0..1]	[72..1]
gi\|194043200, gi... - gi\|87047640\|gb\|ABD18453.1\| ubiquinol-cytochrome c reductase complex [Sus scrofa], gi\|194043200\|ref\|X...	103.0	[0..12]	[70..6]
gi\|5822466, gi\|3... - gi\|5822466\|pdb\|2BCC\|J Chain J, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken, gi\|3660384\|pd...	103.0	[0..12]	[69..5]
gi\|114685787, gi... - gi\|114685789\|ref\|XP_001137262.1\| PREDICTED: ubiquinol-cytochrome c reductase complex 7.2kDa protein ... UQCR10 - ubiquinol-cytochrome c reductase, complex III subunit X	103.0	[0..12]	[69..6]
gi\|149720294 - gi\|149720294\|ref\|XP_001498795.1\| PREDICTED: similar to ubiquinol-cytochrome c reductase complex [Equ... gi\|73994981 - gi\|73994981\|ref\|XP_852402.1\| PREDICTED: similar to ubiquinol-cytochrome c reductase complex 7.2kDa p...	102.0	[0..12]	[70..6]
gi\|11248896, gi\|... - gi\|7669947\|emb\|CAB89234.1\| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana], gi...	102.0	[0..1]	[72..1]

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Predicted Domain #1

Region A:
Residues: [1-72]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESAARRSGG GVLEGFYRLV MRRTPVYVTF VIAGALLGER AVDYGVKTLW EKNNVGKRYE  60
   61 DISVLGQRPV DE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.09691
Match:	1be3J
Description:	Subunit X (nonheme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits