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View Structure Prediction Details

Protein: NPRL2
Organism: Homo sapiens
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPRL2.

Description E-value Query
Range
Subject
Range
gi|114587063 - gi|114587063|ref|XP_001169182.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
0.0 [1..380] [1..380]
gi|57101208 - gi|57101208|ref|XP_533817.1| PREDICTED: similar to Tumor suppressor candidate 4 (NPR2-like) (Gene 21...
0.0 [1..380] [1..380]
gi|109039416 - gi|109039416|ref|XP_001099730.1| PREDICTED: tumor suppressor candidate 4 isoform 4 [Macaca mulatta]
0.0 [1..380] [1..380]
gi|18314624 - gi|18314624|gb|AAH21984.1| Tumor suppressor candidate 4 [Homo sapiens]
0.0 [1..380] [1..380]
NPRL2_MOUSE - Nitrogen permease regulator 2-like protein OS=Mus musculus GN=Nprl2 PE=2 SV=1
0.0 [1..380] [1..380]
NPRL2_BOVIN - Nitrogen permease regulator 2-like protein OS=Bos taurus GN=NPRL2 PE=2 SV=1
0.0 [1..380] [1..380]
gi|27370866, gi|... - gi|27370866|gb|AAH41229.1| Nprl2-pending-prov protein [Xenopus laevis], gi|147906324|ref|NP_00108010...
0.0 [6..380] [5..378]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGCRIECI FFSEFHPTLG PKITYQVPED FISRELFDTV QVYIITKPEL QNKLITVTAM  60
   61 EKKLIGCPVC IEHKKYSRNA LLFNLGFVCD AQAKTCALEP IVKKLAGYLT TLELE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSFVSMEESK QKLVPIMTIL LEELNASGRC TLPIDESNTI HLKVIEQRPD PPVAQEYDVP  60
   61 VFTKDKEDFF NSQWDLTTQQ ILPYIDGFRH IQKISAEADV ELNLVRIAIQ NLLYYGVVTL 120
  121 VSILQYSNVY CPTPKVQDLV DDKSLQEACL SYVTKQGHKR ASLRDVFQLY CSLSPGTTVR 180
  181 DLIGRHPQQL QHVDERKLIQ F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLMKNLIRRL QKYPVRVTRE EQSHPARLYT GCHSYDEICC KTGMSYHELD ERLENDPNII  60
   61 ICWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle