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View Structure Prediction Details

Protein: CE41314
Organism: Caenorhabditis elegans
Length: 484 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41314.

Description E-value Query
Range
Subject
Range
CE01557 - status:Partially_confirmed UniProt:Q09539 protein_id:CAA88263.1
741.0 [0..1] [472..1]
gi|187037699, gi... - gi|39590972|emb|CAE58752.1| Hypothetical protein CBG01943 [Caenorhabditis briggsae], gi|187037699|em...
gi|157767916 - gi|157767916|ref|XP_001675779.1| Hypothetical protein CBG01943 [Caenorhabditis briggsae AF16]
695.0 [0..1] [474..31]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGFIFIIV LTTVSQSFHK SIDISKSPCN DFYDYVCAKD TRSISNLTFT KMNQELEILK  60
   61 PNVTIENNGT FIALDKIVKL TRVMKWCTEI EVLFTGVF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVDYFGDLHS ENKMIHSERY TAVVSRLKEI NTTMANIFYN ALHANTEILQ QMEIPISSKN  60
   61 KFLHHLFNTL KTNAINELET TTISEAAKKS MKKGIEMSKV YFAFYDFNNI TVYKEAKLVY 120
  121 ETEYYRLKKW LSPKPPKNNF LHIFIQNGNL MRVRDLTNPI AEKILRLGAI DASMTLFAKT 180
  181 ISEYDIRFLF QAIVANPAND GFQYLNNNHI TVITRNDLNQ PEKAIADTIF VTTHEIMHRV 240
  241 YPYGNFLMNS NVTTAALQCA RREVQMLGDT DAVKPISGWF NKDVAHEDVV NIMAMRMIMK 300
  301 MATIKSTNEK QLKEALETIV GGLCKQSERK NELIPHHNPL ETSLNCAVRQ YPLFKTLYGC 360
  361 RIGDRMFAKH NFASRLEMML KLKIMQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1dmtA
Description: Neutral endopeptidase (neprilysin)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle