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View Structure Prediction Details

Protein: TRMB_PHOPR
Organism: Photobacterium profundum
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRMB_PHOPR.

Description E-value Query
Range
Subject
Range
gi|90438578, gi|... - gi|90580276|ref|ZP_01236083.1| tRNA (guanine-N(7)-)-methyltransferase [Vibrio angustum S14], gi|9043...
189.0 [0..1] [245..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVSKKSGD VTVTELTEDG KLVRKIRSFV RREGRLTKGQ ESAMDNNWST MGIDFAQQML  60
   61 DWKEVYNREA PIVLEIGFGM GASLVEMAKH APEKDFIGIE VHSPGVGACL MGAEETGLTN 120
  121 LRVMCHDAVE VFDYMIPDGS LETVQLFFPD PWHKTRHHKR RIVQPAFAEM LRKKLKIGGT 180
  181 FHMATDWENY AEHMVEVMNA APGYKNTATD GDYIARPDDR PLTKFEARGH RLGHGVWDMK 240
  241 YTRTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1yzhA
Description: Crystal Structure of the Conserved Hypothetical Protein, Methyltransferase from Streptococcus pneumoniae TIGR4
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methyltransferase activity 3.57681394097837 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 3.49392219433935 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 3.39429041855776 bayes_pls_golite062009
RNA methyltransferase activity 3.07428840534971 bayes_pls_golite062009
rRNA methyltransferase activity 2.29640050660273 bayes_pls_golite062009
transferase activity 2.22303238506686 bayes_pls_golite062009
tRNA methyltransferase activity 1.95598912777096 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
N-methyltransferase activity 0.548554528454085 bayes_pls_golite062009
rRNA (adenine) methyltransferase activity 0.533090627724779 bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity 0.455449410561251 bayes_pls_golite062009
tRNA (guanine) methyltransferase activity 0.203168546434167 bayes_pls_golite062009
protein methyltransferase activity 0.0313727777808413 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle