YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TRL32_ARATH
Organism: Arabidopsis thaliana
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRL32_ARATH.

Description E-value Query
Range
Subject
Range
gi|14626709, gi|... - gi|68394965|ref|XP_702014.1| PREDICTED: hypothetical protein XP_696922 [Danio rerio], gi|56207705|em...
155.0 [0..1] [189..75]

Back

Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEIVNLSSS LRSLNPKISP LVPPYRQTSS SFSRPRNFKY HSFTDKICLA AERIRAVDIQ  60
   61 KQDGGLQELD DSPVSVELGP ICGESHFDQV MEDAQKLGES VVIVWMAAWC RKCIYLKPKL 120
  121 EKLAAEFYPR LRFYHVDVNA VPYRLVSRAG VTKMPTIQLW RDGQKQAEVI GGHKAHFVVN 180
  181 EVREMIENDS IT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 1v98A
Description: Crystal Structure Analysis of Thioredoxin from Thermus thermophilus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle