YRC Public Data Repository - Protein Structure Prediction

Protein:	TATE_ECOLI
Organism:	Escherichia coli
Length:	67 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TATE_ECOLI.

Description	E-value	Query Range	Subject Range
TATB_PSYCK - Sec-independent protein translocase protein TatB OS=Psychrobacter cryohalolentis (strain K5) GN=tatB...	90.0	[0..1]	[66..1]
TATB_PSYAR - Sec-independent protein translocase protein tatB homolog - Psychrobacter arcticum TATB_PSYA2 - Sec-independent protein translocase protein TatB OS=Psychrobacter arcticus (strain DSM 17307 / 273-4...	88.0	[0..1]	[66..1]
TATB_CHRSD - Sec-independent protein translocase protein TatB OS=Chromohalobacter salexigens (strain DSM 3043 / A...	88.0	[0..1]	[67..1]
gi\|116220886, gi... - gi\|75820020\|ref\|ZP_00750078.1\| COG1826: Sec-independent protein secretion pathway components [Vibrio... gi\|153826632, gi... - gi\|153826632\|ref\|ZP_01979299.1\| conserved hypothetical protein [Vibrio cholerae MZO-2], gi\|149739570...	88.0	[0..1]	[67..1]
TATB_SODGM - Sec-independent protein translocase protein TatB OS=Sodalis glossinidius (strain morsitans) GN=tatB ...	87.0	[0..1]	[67..1]
gi\|46911761, gi\|... - gi\|54307341\|ref\|YP_128361.1\| sec-independent translocase [Photobacterium profundum SS9], gi\|46911761...	87.0	[0..1]	[67..1]
TATB_BORA1 - Sec-independent protein translocase protein TatB OS=Bordetella avium (strain 197N) GN=tatB PE=3 SV=1	87.0	[0..1]	[65..1]
TATB_MARHV - Sec-independent protein translocase protein TatB OS=Marinobacter hydrocarbonoclasticus (strain ATCC ...	87.0	[0..1]	[66..1]
TATB_VIBVU - Sec-independent protein translocase protein TatB OS=Vibrio vulnificus GN=tatB PE=3 SV=1 TATB_VIBVU - Sec-independent protein translocase protein TatB OS=Vibrio vulnificus (strain CMCP6) GN=tatB PE=3 SV... TATB_VIBVY - Sec-independent protein translocase protein TatB OS=Vibrio vulnificus (strain YJ016) GN=tatB PE=3 SV...	87.0	[0..1]	[67..1]
gi\|89049722, gi\|... - gi\|89074434\|ref\|ZP_01160911.1\| sec-independent translocase [Photobacterium sp. SKA34], gi\|89049722\|g... gi\|90581031, gi\|... - gi\|90581031\|ref\|ZP_01236831.1\| sec-independent translocase [Vibrio angustum S14], gi\|90437727\|gb\|EAS...	86.0	[0..1]	[67..1]

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Predicted Domain #1

Region A:
Residues: [1-67]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEISITKLL VVAALVVLLF GTKKLRTLGG DLGAAIKGFK KAMNDDDAAA KKGADVDLQA  60
   61 EKLSHKE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	7.086186
Match:	PF02416.7
Description:	No description for PF02416.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits