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View Structure Prediction Details

Protein: CCL5_HORSE
Organism: Equus caballus
Length: 91 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCL5_HORSE.

Description E-value Query
Range		 Subject
Range
gi|164665382, gi... - gi|57527998|ref|NP_001009579.1| chemokine (C-C motif) ligand 3-like 1 [Sus scrofa], gi|49354682|gb|A...
 116.0 [0..1] [91..1]
CCL4_MACMU - C-C motif chemokine 4 OS=Macaca mulatta GN=CCL4 PE=2 SV=1
 116.0 [0..1] [91..1]
CCL4_RAT - C-C motif chemokine 4 OS=Rattus norvegicus GN=Ccl4 PE=3 SV=1
 115.0 [0..1] [91..1]
CCL4_BOVIN - C-C motif chemokine 4 OS=Bos taurus GN=CCL4 PE=3 SV=1
 115.0 [0..1] [91..1]
gi|55646301 - gi|55646301|ref|XP_511774.1| PREDICTED: chemokine (C-C motif) ligand 4-like 2 [Pan troglodytes]
 113.0 [0..1] [91..1]
CCL3L1, CCL3L3 - chemokine (C-C motif) ligand 3-like 3, chemokine (C-C motif) ligand 3-like 1
 113.0 [0..1] [91..1]

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Predicted Domain #1
Region A:
Residues: [1-91] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFAAALAV ILATATFCTP ASASPYASDT TPCCFAYISR PLPRAHIQEY FYTSSKCSIP  60
   61 AVVFVTRKKR QVCANPEKKW VREYINTLEM S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 1hrjA
Description: RANTES (regulated upon activation, normal T-cell expressed and secreted)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle