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View Structure Prediction Details

Protein: STP2_PANPA
Organism: Pan paniscus
Length: 133 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STP2_PANPA.

Description E-value Query
Range
Subject
Range
gi|110055, gi|54874 - gi|54874|emb|CAA34914.1| unknown protein [Mus musculus], pir||S14529 transition protein 2 - mouse
143.0 [0..1] [133..403]
gi|109127617 - gi|109127617|ref|XP_001106917.1| PREDICTED: similar to Nuclear transition protein 2 (TP-2) (TP2) [Ma...
131.0 [0..1] [133..52]
gi|193073246, gi... - gi|193073246|tpg|DAA06279.1| TPA_inf: transition protein 2 [Pan troglodytes], gi|114660997|ref|XP_00...
124.0 [0..1] [133..1]
STP2_MACFA - Nuclear transition protein 2 OS=Macaca fascicularis GN=TNP2 PE=2 SV=2
121.0 [0..1] [133..1]
STP2_PONPY - Nuclear transition protein 2 (Fragment) OS=Pongo pygmaeus GN=TNP2 PE=2 SV=1
120.0 [0..1] [132..1]
STP2_BOVIN - Nuclear transition protein 2 OS=Bos taurus GN=TNP2 PE=2 SV=2
108.0 [0..1] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTKTHSLPI THTQLHSNSQ PQSCTCTHHR QTFSQSCRQS HRGSRSRSSS QSPASHRNPT  60
   61 GAHSSSGHQS QSPNTSPPPK RHKKTMNSHH SPMRPTLHCS CPKNRKNLEG KLKTKKMAKR 120
  121 IQQVYKTKTR SSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 87.309804
Match: PF01254.9
Description: No description for PF01254.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle