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View Structure Prediction Details

Protein: stnA-PC, FBpp031...
Organism: Drosophila melanogaster
Length: 850 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stnA-PC, FBpp031....

Description E-value Query
Range
Subject
Range
gi|3138878, gi|7... - pir||T13352 stn-A protein - fruit fly (Drosophila melanogaster), gi|3138878|gb|AAC16665.1| stn-A [Dr...
305.0 [0..18] [850..18]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLPKGLKK KKKKSKKDQE LFTEEELEQY KRDLKAKQEA AATKSDAGES DGASSDVEAH  60
   61 HEPVAFNSGL GSGSSSSILN AQQQLSDQNQ GAAGGDEEWA KFKALTSGVD SILHKTQDEL 120
  121 DRIKKESFYQ RLPSAAEKKK QKEEEAARLE AEQQEREKQR LGQIEAQRDK LAEAVVQLSE 180
  181 SEEEAGDYEA DDIFATDYIE AITSGELQLA VVPDSPVLAE DGPDPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [227-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTAYAEKVIV GADRAKGNKK LVSLGAAVEV LSGRVDREHA VALANPKRKL RKGIQNLLLS  60
   61 ESIELADSEA ELLAATSNAE PQHNLLDDLD EELSESSVPI DLSVSLHLHL IKHKQPVEEE 120
  121 EELEQKGREN QLLNPDLSEF DSLKDEEDDE FAELAAESLT KKEEVTVVSQ VVLPVAQLPT 180
  181 EAFEAGSWAE FEEQSGQEPG KPKRPPPPVR PPTGPHIVPG AIYVSEDEEE NP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [459-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDDPFNTNYA EQVIKKTTVL EEDDDFDPRA EEHATEPPFL AAPQRDLLAG SATDLSQVVP  60
   61 APLAPTLSVD QEAEDFDPFD TSAVSALVQP KSTELRFLER ELLNYSGLDG VTLKHSLSDQ 120
  121 DFDPRADQKE PAAPQVKLEQ KETDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [604-755]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTAQRKSSLS LNIQAKSVGF LVPASDLLGA GNELGASKKP LTPYYAPSDN RLQEREREAE  60
   61 DVDPFDTSHV PEAKLSDIEL KHIEKDLISV PANLRHSLSD PDFDPRAPPT PVPAEVLLAV 120
  121 EENINIKVLT PAQDRKKLTN SGGSGKSEED ID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [756-850]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFDTSIAANL QPGQTELKLL ENELLPETKT LVTDVLDVQS DAQELGLGDK VLTPSTHSRP  60
   61 SLPAQDIDPF DTSIAENLAP GEAEIKLLES ELIER

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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