YRC Public Data Repository - Protein Structure Prediction

Protein:	SSPH_BACHD
Organism:	Bacillus halodurans
Length:	60 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSPH_BACHD.

Description	E-value	Query Range	Subject Range
gi\|89097489, gi\|... - gi\|89097489\|ref\|ZP_01170378.1\| Small acid soluble spore protein [Bacillus sp. NRRL B-14911], gi\|8908...	98.0	[0..2]	[59..52]
gi\|47568057, gi\|... - gi\|47568057\|ref\|ZP_00238762.1\| small acid-soluble spore protein-related protein [Bacillus cereus G92...	92.0	[0..2]	[59..24]
SSPH_BACLD - Small, acid-soluble spore protein H OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505...	92.0	[0..2]	[60..1]
gi\|229188820, gi... - gi\|229188820\|ref\|ZP_04315854.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus ATCC 10876], ... gi\|229148952, gi... - gi\|229148952\|ref\|ZP_04277197.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus m1550], gi\|22... gi\|228606321, gi... - gi\|229177140\|ref\|ZP_04304529.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus 172560W], gi\|... gi\|228860330, gi... - gi\|228899299\|ref\|ZP_04063562.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis IBL 42... gi\|228951106, gi... - gi\|228951106\|ref\|ZP_04113222.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|218540983, gi... - gi\|218895669\|ref\|YP_002444080.1\| small acid-soluble spore protein, H-type [Bacillus cereus G9842], g... gi\|228957031, gi... - gi\|228957031\|ref\|ZP_04118806.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228919469, gi... - gi\|228919469\|ref\|ZP_04082833.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228821815, gi... - gi\|228937851\|ref\|ZP_04100480.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228782446, gi... - gi\|228977307\|ref\|ZP_04137703.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis Bt407]... gi\|229042472, gi... - gi\|229042472\|ref\|ZP_04190217.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus AH676], gi\|22... gi\|218231242, gi... - gi\|218231242\|ref\|YP_002365410.1\| small acid-soluble spore protein, H-type [Bacillus cereus B4264], g... gi\|228963707, gi... - gi\|228963707\|ref\|ZP_04124849.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|206737522, gi... - gi\|206968602\|ref\|ZP_03229558.1\| small acid-soluble spore protein, H-type [Bacillus cereus AH1134], g... gi\|228970732, gi... - gi\|228970732\|ref\|ZP_04131373.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... SSPH1_BACCR - Small, acid-soluble spore protein H 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NB... gi\|228657367, gi... - gi\|229126045\|ref\|ZP_04255067.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BDRD-Cer4], g... gi\|229143338, gi... - gi\|229143338\|ref\|ZP_04271769.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BDRD-ST24], g... gi\|228714760, gi... - gi\|229068299\|ref\|ZP_04201602.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus F65185], gi\|2... gi\|229108220, gi... - gi\|229108220\|ref\|ZP_04237842.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus Rock1-15], gi...	92.0	[0..2]	[59..1]
gi\|161611189 - gi\|161611189\|ref\|YP_017239.3\| acid-soluble spore protein H [Bacillus anthracis str. 'Ames Ancestor'] gi\|161486566 - gi\|161486566\|ref\|NP_843144.2\| acid-soluble spore protein H [Bacillus anthracis str. Ames] gi\|49177531, gi\|... - gi\|49183604\|ref\|YP_026856.1\| acid-soluble spore protein H [Bacillus anthracis str. Sterne], gi\|49177...	92.0	[0..2]	[59..24]
SSPH1_GEOKA - Small, acid-soluble spore protein H 1 OS=Geobacillus kaustophilus (strain HTA426) GN=sspH1 PE=3 SV=1 gi\|229500449, gi... - gi\|229500449\|ref\|ZP_04394112.1\| small acid-soluble spore protein, H-type [Geobacillus sp. Y412MC52],... SSPH1_GEOKA - Small, acid-soluble spore protein H 1 OS=Geobacillus kaustophilus GN=sspH1 PE=2 SV=1 gi\|221089785, gi... - gi\|221089785\|ref\|ZP_03559294.1\| small acid-soluble spore protein, H-type [Geobacillus sp. Y412MC61],...	91.0	[0..2]	[60..1]
gi\|228651898, gi... - gi\|229131554\|ref\|ZP_04260440.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BDRD-ST196], ... gi\|228751173, gi... - gi\|229010040\|ref\|ZP_04167254.1\| Small, acid-soluble spore protein H 1 [Bacillus mycoides DSM 2048], ... gi\|229165555, gi... - gi\|229165555\|ref\|ZP_04293332.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus AH621], gi\|22... gi\|163938537, gi... - gi\|89209433\|ref\|ZP_01187851.1\| small, acid-soluble spore protein [Bacillus weihenstephanensis KBAB4]...	91.0	[0..2]	[59..1]
SSPH1_BACAN - Small, acid-soluble spore protein H 1 OS=Bacillus anthracis GN=sspH1 PE=3 SV=1 gi\|170708488, gi... - gi\|170708488\|ref\|ZP_02898930.1\| small acid-soluble spore protein, H-type [Bacillus anthracis str. A0... gi\|227003832, gi... - gi\|227816517\|ref\|YP_002816526.1\| small acid-soluble spore protein, H-type [Bacillus anthracis str. C... gi\|190569404, gi... - gi\|190569404\|ref\|ZP_03022290.1\| small acid-soluble spore protein, H-type [Bacillus anthracis Tsianko... gi\|229267787, gi... - gi\|229603379\|ref\|YP_002865212.1\| small acid-soluble spore protein, H-type [Bacillus anthracis str. A... gi\|254684309 - gi\|254684309\|ref\|ZP_05148169.1\| acid-soluble spore protein H [Bacillus anthracis str. CNEVA-9066] gi\|254722112 - gi\|254722112\|ref\|ZP_05183901.1\| acid-soluble spore protein H [Bacillus anthracis str. A1055] gi\|254738773 - gi\|254738773\|ref\|ZP_05196476.1\| acid-soluble spore protein H [Bacillus anthracis str. Western North ... gi\|47551541, gi\|... - gi\|47777836\|ref\|YP_017239.2\| acid-soluble spore protein H [Bacillus anthracis str. 'Ames Ancestor'],... gi\|30260767, gi\|... - gi\|30260767\|ref\|NP_843144.1\| acid-soluble spore protein H [Bacillus anthracis str. Ames], gi\|3025421... gi\|254754998 - gi\|254754998\|ref\|ZP_05207032.1\| acid-soluble spore protein H [Bacillus anthracis str. Vollum] gi\|254762269 - gi\|254762269\|ref\|ZP_05214113.1\| acid-soluble spore protein H [Bacillus anthracis str. Australia 94] gi\|65318037, gi\|... - gi\|65318037\|ref\|ZP_00390996.1\| hypothetical protein Bant_01001259 [Bacillus anthracis str. A2012], r...	91.0	[0..2]	[59..1]
gi\|228600566, gi... - gi\|229182942\|ref\|ZP_04310175.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BGSC 6E1], gi... gi\|49480198, gi\|... - gi\|49480198\|ref\|YP_034870.1\| acid-soluble spore protein H [Bacillus thuringiensis serovar konkukian ... gi\|228693704, gi... - gi\|229089674\|ref\|ZP_04220936.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus Rock3-42], gi... gi\|42779759, gi\|... - gi\|42779759\|ref\|NP_977006.1\| acid-soluble spore protein H [Bacillus cereus ATCC 10987], gi\|42735676\|... gi\|228815267, gi... - gi\|228944365\|ref\|ZP_04106738.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228846352, gi... - gi\|228913301\|ref\|ZP_04076935.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|222094364, gi... - gi\|222094364\|ref\|YP_002528423.1\| small, acid-soluble spore protein [Bacillus cereus Q1], gi\|22123842...	90.0	[0..2]	[59..24]
SSPH_BACSU - Small, acid-soluble spore protein H OS=Bacillus subtilis (strain 168) GN=sspH PE=1 SV=1 SSPH_BACSU - Small, acid-soluble spore protein H OS=Bacillus subtilis GN=sspH PE=1 SV=1 gi\|221312971 - gi\|221312971\|ref\|ZP_03594776.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str.... gi\|221317897 - gi\|221317897\|ref\|ZP_03599191.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str.... gi\|221322170 - gi\|221322170\|ref\|ZP_03603464.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str....	90.0	[0..2]	[59..1]

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Predicted Domain #1

Region A:
Residues: [1-60]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNTQRAQEI AASPIMANVT YQEVPIYIQH VDEQNETARI YPLDNPELEQ DVPLSQLMEH  60
   61

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	39.769551
Match:	PF08141.3
Description:	No description for PF08141.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits