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View Structure Prediction Details

Protein: SP22_ORYSA, SPCS...
Organism: Oryza sativa
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SP22_ORYSA, SPCS....

Description E-value Query
Range
Subject
Range
SPC3A_ARATH - Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV=1
226.0 [0..1] [166..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSWVQRLLT TATTAALLLL AACCAASALD AFHVPSVQAQ AHVTKINRFH KQLNGNDKVT  60
   61 LTFNLSANLE SLFTWSTKQV FVFLTAEYEN SKNSLNQVSL WDHIIPDKDK ANLQVEVKSK 120
  121 YPLIDQGSSL RGKKVQLVLH WHVMPKAGVM IRDRMALSEF NLPDSYTS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 97.39794
Match: PF04573.3
Description: No description for PF04573.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle