YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG7639-PB
Organism: Drosophila melanogaster
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7639-PB.

Description E-value Query
Range
Subject
Range
gi|34497659, gi|... - gi|34497659|ref|NP_901874.1| outer membrane protein [Chromobacterium violaceum ATCC 12472], gi|34103...
293.0 [0..1] [442..326]

Back

Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSGRDGGA SKDSKYDLSK ISARVDRVNV SGLLRTHNDY VMRAADGLFK ASNFQDLMLE  60
   61 AMSTKSYLHE LGIFKDVSVH IDVSRGADAS PQGYEVTFKG NEMSRMMGSA GTEIGQNEGS 120
  121 LRTELTIPNI LGRGENISLQ GSYSSTRAND LQLKFWKPFF HTRFKENRPE MSFSIFRQTD 180
  181 RFDISSFQTT NIGYLVDFSA HTMVGVDLTH SLQYENAIRD VGLLNKSVPF AIRDHCGPKL 240
  241 ASLLRYSVVY DNRDGNVFPT RGIYLKSVNE YCGLGGNVAY TSSTAHGELN VPLFAGLVAQ 300
  301 FCARVGVVKE TKNTTQLPIS SLFYCGGPLT LRGFKFGGAG PVVESTPIGA QSFWCTGAHL 360
  361 WAPLPFAGVF KNLASHFRMH FFYNIGNNNS FSTENMRSAF GMGLAVKLAE RARIELNYCV 420
  421 PVRHQDTDRI LNGFQFGIGY EFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle