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View Structure Prediction Details

Protein: RS26_OCTVU
Organism: Octopus vulgaris
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS26_OCTVU.

Description E-value Query
Range
Subject
Range
gi|109478147 - gi|109478147|ref|XP_216698.3| PREDICTED: similar to 40S ribosomal protein S26 [Rattus norvegicus]
194.0 [0..4] [102..102]
gi|41152199, gi|... - gi|41152199|ref|NP_957036.1| ribosomal protein S26 [Danio rerio], gi|37748252|gb|AAH59532.1| Ribosom...
191.0 [0..1] [114..1]
gi|15294063 - gi|15294063|gb|AAK95208.1|AF402834_1 40S ribosomal protein S26-1 [Ictalurus punctatus]
189.0 [0..1] [114..1]
gi|114621444, gi... - gi|55631132|ref|XP_519920.1| PREDICTED: similar to 40S ribosomal protein S26-2 isoform 2 [Pan troglo...
188.0 [0..1] [114..1]
gi|50416640, gi|... - gi|52346158|ref|NP_001005121.1| ribosomal protein S26 [Xenopus (Silurana) tropicalis], gi|50416640|g...
185.0 [0..1] [114..1]
gi|61826195 - gi|61826195|ref|XP_601973.1| PREDICTED: similar to 40S ribosomal protein S26 [Bos taurus]
185.0 [0..1] [114..1]
gi|47229575 - gi|47229575|emb|CAG06771.1| unnamed protein product [Tetraodon nigroviridis]
184.0 [0..2] [114..1]
gi|50604177, gi|... - gi|50604177|gb|AAH77637.1| MGC86356 protein [Xenopus laevis], gi|148230110|ref|NP_001086904.1| MGC86...
184.0 [0..1] [113..1]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKRRNNGR GKKGRGHVKY IRCTNCARCV PKDKAIKKFV IRNIVEAAAV RDISDASVYE  60
   61 VYALPKLYAK LLYCVSCAIH SKIVRNRSRE ARKDRTPPIR FRPMRGEGGQ NARPGQANKL 120
  121 FNMSPRK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 74.60206
Match: PF01283.10
Description: No description for PF01283.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle