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View Structure Prediction Details

Protein: RS18_CHLMU
Organism: Chlamydia muridarum
Length: 81 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS18_CHLMU.

Description E-value Query
Range
Subject
Range
RS18_PSYA2 - 30S ribosomal protein S18 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rpsR PE=3 SV=1
RS18_PSYCK - 30S ribosomal protein S18 OS=Psychrobacter cryohalolentis (strain K5) GN=rpsR PE=3 SV=1
111.0 [0..10] [80..3]
RS18_PSYWF - 30S ribosomal protein S18 OS=Psychrobacter sp. (strain PRwf-1) GN=rpsR PE=3 SV=1
111.0 [0..10] [80..3]
gi|255311638 - gi|255311638|ref|ZP_05354208.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276]
gi|237803233, gi... - gi|237803233|ref|YP_002888427.1| SSU ribosomal protein S18 [Chlamydia trachomatis], gi|231274467|emb...
RS18_CHLTA - 30S ribosomal protein S18 OS=Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-...
RS18_CHLTB - 30S ribosomal protein S18 OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) GN=rpsR PE=3...
gi|255507420 - gi|255507420|ref|ZP_05383059.1| 30S ribosomal protein S18 [Chlamydia trachomatis D(s)2923]
RS18_CHLT2 - 30S ribosomal protein S18 OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) GN=rpsR...
gi|255503739 - gi|255503739|ref|ZP_05382129.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70s]
RS18_CHLTR - 30S ribosomal protein S18 OS=Chlamydia trachomatis GN=rpsR PE=3 SV=1
RS18_CHLTR - 30S ribosomal protein S18 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=rpsR PE=3 SV=1
gi|255349202 - gi|255349202|ref|ZP_05381209.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70]
gi|255317939 - gi|255317939|ref|ZP_05359185.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276s]
111.0 [0..1] [81..1]
RS18_BACCN - 30S ribosomal protein S18 OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-...
110.0 [0..11] [80..8]
RS18_KORVE - 30S ribosomal protein S18 OS=Koribacter versatilis (strain Ellin345) GN=rpsR PE=3 SV=1
110.0 [0..9] [77..51]
RS18_BACST - (P10806) 30S ribosomal protein S18 (BS21) (BS19)
110.0 [0..17] [81..13]
RS18_GEOKA - 30S ribosomal protein S18 OS=Geobacillus kaustophilus (strain HTA426) GN=rpsR PE=3 SV=1
gi|229497916, gi... - gi|229497916|ref|ZP_04391615.1| ribosomal protein S18 [Geobacillus sp. Y412MC52], gi|229331342|gb|EE...
gi|196249872, gi... - gi|196249872|ref|ZP_03148568.1| ribosomal protein S18 [Geobacillus sp. G11MC16], gi|196210748|gb|EDY...
gi|221086943, gi... - gi|221086943|ref|ZP_03556483.1| ribosomal protein S18 [Geobacillus sp. Y412MC61], gi|220708996|gb|EE...
RS18_GEOTN - 30S ribosomal protein S18 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsR PE=3 SV=2
RS18_GEOSE - 30S ribosomal protein S18 OS=Geobacillus stearothermophilus GN=rpsR PE=1 SV=2
RS18_GEOKA - 30S ribosomal protein S18 OS=Geobacillus kaustophilus GN=rpsR PE=3 SV=1
110.0 [0..17] [81..14]
gi|89084338, gi|... - gi|89100929|ref|ZP_01173776.1| ribosomal protein S18 [Bacillus sp. NRRL B-14911], gi|89084338|gb|EAR...
109.0 [0..17] [81..17]
gi|242349573, gi... - gi|242372656|ref|ZP_04818230.1| 30S ribosomal protein S18 [Staphylococcus epidermidis M23864:W1], gi...
RS18_STAEP - (Q8CQP6) 30S ribosomal protein S18
RS18_STAEQ - 30S ribosomal protein S18 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpsR PE=3 SV=...
gi|223043454, gi... - gi|223043454|ref|ZP_03613500.1| ribosomal protein S18 [Staphylococcus capitis SK14], gi|222443243|gb...
RS18_STAES - 30S ribosomal protein S18 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpsR PE=3 SV=1
109.0 [0..15] [81..13]
gi|228271886, gi... - gi|228474191|ref|ZP_04058928.1| ribosomal protein S18 [Staphylococcus hominis SK119], gi|228271886|g...
RS18_STAHJ - 30S ribosomal protein S18 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsR PE=3 SV=1
109.0 [0..15] [81..13]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRPVHNEHR RKRFAKKCPF VSAGWKTIDY KDVVTLKRFI TERGKILPRR ITGVSSRFQA  60
   61 LLAQAVKRAR HVGLLPFVGE D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.39794
Match: 1vs5R
Description: No description for 1vs5R was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 3.74194835757561 bayes_pls_golite062009
structural molecule activity 3.45591847600399 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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