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View Structure Prediction Details

Protein: RL31_PAROL
Organism: Paralichthys olivaceus
Length: 124 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL31_PAROL.

Description E-value Query
Range
Subject
Range
gi|73956853 - gi|73956853|ref|XP_546758.2| PREDICTED: similar to ribosomal protein L31 [Canis familiaris]
251.0 [0..2] [124..72]
gi|50730448 - gi|50730448|ref|XP_416909.1| PREDICTED: similar to ribosomal protein L31 [Gallus gallus]
247.0 [0..1] [124..48]
gi|82898757, gi|... - gi|82898757|ref|XP_930429.1| PREDICTED: similar to ribosomal protein L31 isoform 2 [Mus musculus], g...
235.0 [0..1] [124..1]
gi|62648383, gi|... - gi|62648383|ref|XP_578388.1| PREDICTED: similar to ribosomal protein L31 [Rattus norvegicus], gi|109...
230.0 [0..1] [124..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTKKGEKK KGRSAINEVV TREYTINVHK RIHGVGFKKR APRAIKEIRK FAVKEMGTPD  60
   61 VRIDTRLNKA VWSKGVRNVP YRIRVRLSRK RNEDEDSPNK LYTLVTYVPV TTCKGLQTVN 120
  121 VDEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.154902
Match: 1s1iW
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle