YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RL31_AEDAE
Organism: Aedes aegypti
Length: 124 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL31_AEDAE.

Description E-value Query
Range
Subject
Range
gi|73956853 - gi|73956853|ref|XP_546758.2| PREDICTED: similar to ribosomal protein L31 [Canis familiaris]
252.0 [0..2] [121..74]
gi|50730448 - gi|50730448|ref|XP_416909.1| PREDICTED: similar to ribosomal protein L31 [Gallus gallus]
246.0 [0..3] [121..53]
gi|148672373, gi... - gi|94399943|ref|XP_001002948.1| PREDICTED: similar to ribosomal protein L31 [Mus musculus], gi|94399...
232.0 [0..11] [121..45]
gi|109512301 - gi|109512301|ref|XP_001066801.1| PREDICTED: similar to ribosomal protein L31 [Rattus norvegicus]
226.0 [0..11] [121..43]

Back

Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTKTEKKA KSAINEVVTR ECTINLNRRL HKVGYKKRAP RAVKIVRKFA EKEMGTNDVR  60
   61 IDTRLNKALW HRGIRNPPFR IRVRLSRRRN DDEDSPNKLY TLVTYVPVST FKELQTENVE 120
  121 STED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.0
Match: 1s1iW
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle