| Protein: | PUM1 |
| Organism: | Homo sapiens |
| Length: | 1186 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1186] | [1..1186] |
|
|
0.0 | [1..1186] | [1..1186] |
|
|
0.0 | [1..1186] | [1..1188] |
|
|
0.0 | [1..1186] | [1..1186] |
|
|
0.0 | [1..1186] | [1..1189] |
|
Region A: Residues: [1-231] |
1 11 21 31 41 51
| | | | | |
1 MSVACVLKRK AVLWQDSFSP HLKHHPQEPA NPNMPVVLTS GTGSQAQPQP AANQALAAGT 60
61 HSSPVPGSIG VAGRSQDDAM VDYFFQRQHG EQLGGGGSGG GGYNNSKHRW PTGDNIHAEH 120
121 QVRSMDELNH DFQALALEGR AMGEQLLPGK KFWETDESSK DGPKGIFLGD QWRDSAWGTS 180
181 DHSVSQPIMV QRRPGQSFHV NSEVNSVLSP RSESGGLGVS MVEYVLSSSP G
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [232-326] |
1 11 21 31 41 51
| | | | | |
1 DSCLRKGGFG PRDADSDEND KGEKKNKGTF DGDKLGDLKE EGDVMDKTNG LPVQNGIDAD 60
61 VKDFSRTPGN CQNSANEVDL LGPNQNGSEG LAQLT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [327-510] |
1 11 21 31 41 51
| | | | | |
1 STNGAKPVED FSNMESQSVP LDPMEHVGME PLQFDYSGTQ VPVDSAAATV GLFDYNSQQQ 60
61 LFQRPNALAV QQLTAAQQQQ YALAAAHQPH IGLAPAAFVP NPYIISAAPP GTDPYTAGLA 120
121 AAATLGPAVV PHQYYGVTPW GVYPASLFQQ QAAAAAAATN SANQQTTPQA QQGQQQVLRG 180
181 GASQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [511-828] |
1 11 21 31 41 51
| | | | | |
1 RPLTPNQNQQ GQQTDPLVAA AAVNSALAFG QGLAAGMPGY PVLAPAAYYD QTGALVVNAG 60
61 ARNGLGAPVR LVAPAPVIIS SSAAQAAVAA AAASANGAAG GLAGTTNGPF RPLGTQQPQP 120
121 QPQQQPNNNL ASSSFYGNNS LNSNSQSSSL FSQGSAQPAN TSLGFGSSSS LGATLGSALG 180
181 GFGTAVANSN TGSGSRRDSL TGSSDLYKRT SSSLTPIGHS FYNGLSFSSS PGPVGMPLPS 240
241 QGPGHSQTPP PSLSSHGSSS SLNLGGLTNG SGRYISAAPG AEAKYRSASS ASSLFSPSST 300
301 LFSSSRLRYG MSDVMPSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [829-1186] |
1 11 21 31 41 51
| | | | | |
1 RSRLLEDFRN NRYPNLQLRE IAGHIMEFSQ DQHGSRFIQL KLERATPAER QLVFNEILQA 60
61 AYQLMVDVFG NYVIQKFFEF GSLEQKLALA ERIRGHVLSL ALQMYGCRVI QKALEFIPSD 120
121 QQNEMVRELD GHVLKCVKDQ NGNHVVQKCI ECVQPQSLQF IIDAFKGQVF ALSTHPYGCR 180
181 VIQRILEHCL PDQTLPILEE LHQHTEQLVQ DQYGNYVIQH VLEHGRPEDK SKIVAEIRGN 240
241 VLVLSQHKFA SNVVEKCVTH ASRTERAVLI DEVCTMNDGP HSALYTMMKD QYANYVVQKM 300
301 IDVAEPGQRK IVMHKIRPHI ATLRKYTYGK HILAKLEKYY MKNGVDLGPI CGPPNGII
|
| Detection Method: | |
| Confidence: | 158.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.786930091838216 | bayes_pls_golite062009 |
| protein binding | 0.273418027792729 | bayes_pls_golite062009 |
