| Protein: | APRR7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 727 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRR7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
400.0 | [0..1] | [727..1] |
|
|
316.0 | [0..8] | [722..11] |
|
|
316.0 | [0..8] | [722..11] |
|
|
306.0 | [0..78] | [516..2] |
|
|
300.0 | [0..79] | [498..3] |
|
|
299.0 | [0..79] | [512..4] |
|
|
297.0 | [0..79] | [457..6] |
|
|
296.0 | [0..77] | [512..2] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS 60
61 QQTAATVCWE RFL
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 2ayxA |
| Description: | No description for 2ayxA was found. |
|
Region A: Residues: [74-451] |
1 11 21 31 41 51
| | | | | |
1 HVRTIRVLLV ENDDCTRYIV TALLRNCSYE VVEASNGIQA WKVLEDLNNH IDIVLTEVIM 60
61 PYLSGIGLLC KILNHKSRRN IPVIMMSSHD SMGLVFKCLS KGAVDFLVKP IRKNELKILW 120
121 QHVWRRCQSS SGSGSESGTH QTQKSVKSKS IKKSDQDSGS SDENENGSIG LNASDGSSDG 180
181 SGAQSSWTKK AVDVDDSPRA VSLWDRVDST CAQVVHSNPE FPSNQLVAPP AEKETQEHDD 240
241 KFEDVTMGRD LEISIRRNCD LALEPKDEPL SKTTGIMRQD NSFEKSSSKW KMKVGKGPLD 300
301 LSSESPSSKQ MHEDGGSSFK AMSSHLQDNR EPEAPNTHLK TLDTNEASVK ISEELMHVEH 360
361 SSKRHRGTKD DGTLVRDD
|
| Detection Method: | |
| Confidence: | 62.154902 |
| Match: | 1ny5A |
| Description: | Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [452-523] |
1 11 21 31 41 51
| | | | | |
1 RNVLRRSEGS AFSRYNPASN ANKISGGNLG STSLQDNNSQ DLIKKTEAAY DCHSNMNESL 60
61 PHNHRSHVGS NN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.449 | a.3.1 | Cytochrome c |
| View | Download | 0.406 | d.327.1 | Description not found. |
| View | Download | 0.324 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.324 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.321 | d.304.1 | Description not found. |
| View | Download | 0.311 | a.74.1 | Cyclin-like |
| View | Download | 0.311 | a.74.1 | Cyclin-like |
| View | Download | 0.250 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.244 | a.77.1 | DEATH domain |
| View | Download | 0.237 | a.77.1 | DEATH domain |
|
Region A: Residues: [524-727] |
1 11 21 31 41 51
| | | | | |
1 FDMSSTTENN AFTKPGAPKV SSAGSSSVKH SSFQPLPCDH HNNHASYNLV HVAERKKLPP 60
61 QCGSSNVYNE TIEGNNNTVN YSVNGSVSGS GHGSNGPYGS SNGMNAGGMN MGSDNGAGKN 120
121 GNGDGSGSGS GSGSGNLADE NKISQREAAL TKFRQKRKER CFRKKVRYQS RKKLAEQRPR 180
181 VRGQFVRKTA AATDDNDIKN IEDS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
