| Protein: | PROF1_RICCO |
| Organism: | Ricinus communis |
| Length: | 131 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PROF1_RICCO.
| Description | E-value | Query Range |
Subject Range |
|
|
224.0 | [0..1] | [131..1] |
|
|
223.0 | [0..1] | [131..1] |
|
|
223.0 | [0..1] | [131..1] |
|
|
222.0 | [0..1] | [131..1] |
|
|
221.0 | [0..1] | [131..1] |
|
|
221.0 | [0..1] | [131..1] |
|
|
221.0 | [0..1] | [131..1] |
|
|
220.0 | [0..1] | [131..1] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MSWQTYVDDH LMCEIEGNHL TSAAIIGQDG SVWAQSSTFP QFKPEEITAI MNDFNEPGSL 60
61 APTGLYLSGT KYMVIQGEPG AVIRGKKGPG GVTVKKTNQA LIIGIYDEPM TPGQCNMIVE 120
121 RLGDYLIDQG L
|
| Detection Method: |  |
| Confidence: | 55.522879 |
| Match: | 1g5uA |
| Description: | Profilin (actin-binding protein) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.981958446142 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.51470611165788 | bayes_pls_golite062009 |
| actin monomer binding | 3.80837480536839 | bayes_pls_golite062009 |
| binding | 3.26636517628678 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 3.24248939295046 | bayes_pls_golite062009 |
| protein binding | 2.14534188091242 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.69872978885701 | bayes_pls_golite062009 |
| phospholipid binding | 1.52027694872856 | bayes_pls_golite062009 |
| transporter activity | 1.434681455285 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.23300160340736 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.490905558612378 | bayes_pls_golite062009 |
