YRC Public Data Repository - Protein Structure Prediction

Protein:	PHOH_ECOLI
Organism:	Escherichia coli
Length:	354 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHOH_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|187732273, gi... - gi\|187732273\|ref\|YP_001880796.1\| protein phoH [Shigella boydii CDC 3083-94], gi\|187429265\|gb\|ACD0853... gi\|82544502, gi\|... - gi\|82544502\|ref\|YP_408449.1\| hypothetical protein SBO_2038 [Shigella boydii Sb227], gi\|81245913\|gb\|A...	275.0	[0..1]	[354..1]
gi\|25311212 - gi\|25311212\|pir\|\|B85647 hypothetical protein phoH [imported] - Escherichia coli (strain O157:H7, su... gi\|15801011, gi\|... - gi\|15801011\|ref\|NP_287027.1\| hypothetical protein Z1522 [Escherichia coli O157:H7 EDL933], gi\|125143...	275.0	[0..1]	[354..1]
gi\|83570550 - gi\|83570550\|ref\|ZP_00921994.1\| COG1702: Phosphate starvation-inducible protein PhoH, predicted ATPas...	275.0	[0..1]	[354..1]
gi\|73855060, gi\|... - gi\|74311583\|ref\|YP_310002.1\| hypothetical protein SSON_1039 [Shigella sonnei Ss046], gi\|73855060\|gb\|...	274.0	[0..1]	[354..1]
gi\|110641203, gi... - gi\|110641203\|ref\|YP_668933.1\| hypothetical protein ECP_1019 [Escherichia coli 536], gi\|110342795\|gb\|... gi\|191172460, gi... - gi\|191172460\|ref\|ZP_03034001.1\| protein phoH [Escherichia coli F11], gi\|190907344\|gb\|EDV66942.1\| pro...	269.0	[0..1]	[354..1]
gi\|56708797, gi\|... - gi\|56708797\|ref\|YP_164838.1\| PhoH family protein [Ruegeria pomeroyi DSS-3], gi\|56680482\|gb\|AAV97147....	263.0	[0..36]	[353..4]
gi\|89069599, gi\|... - gi\|89069599\|ref\|ZP_01156938.1\| PhoH family protein [Oceanicola granulosus HTCC2516], gi\|89044797\|gb\|...	263.0	[0..37]	[353..4]
gi\|22537650, gi\|... - gi\|22537650\|ref\|NP_688501.1\| PhoH family protein [Streptococcus agalactiae 2603V/R], gi\|22534537\|gb\|...	262.0	[0..43]	[354..16]
gi\|110681056, gi... - gi\|110681056\|ref\|YP_684063.1\| phosphate starvation inducible protein, putative [Roseobacter denitrif...	262.0	[0..51]	[353..19]
gi\|166854221, gi... - gi\|167039981\|ref\|YP_001662966.1\| PhoH family protein [Thermoanaerobacter sp. X514], gi\|166854221\|gb\|... gi\|242257146, gi... - gi\|242257146\|ref\|ZP_04802020.1\| PhoH family protein [Thermoanaerobacter sp. X513], gi\|242231323\|gb\|E...	261.0	[0..52]	[353..7]

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Predicted Domain #1

Region A:
Residues: [1-354]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTSCTGHVL DNQRATTRGV FSSGSHLVTL HFQPHPFFSC VTDAVNGARS RFSAFYPKAN  60
   61 YGLQGSQPSD VRAHNRAANG ACDEYKQLKV LSMGRQKAVI KARREAKRVL RRDSRSHKQR 120
  121 EEESVTSLVQ MGGVEAIGMA RDSRDTSPIL ARNEAQLHYL KAIESKQLIF ATGEAGCGKT 180
  181 WISAAKAAEA LIHKDVDRII VTRPVLQADE DLGFLPGDIA EKFAPYFRPV YDVLVRRLGA 240
  241 SFMQYCLRPE IGKVEIAPFA YMRGRTFENA VVILDEAQNV TAAQMKMFLT RLGENVTVIV 300
  301 NGDITQCDLP RGVCSGLSDA LERFEEDEMV GIVRFGKEDC VRSALCQRTL HAYS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	7.30103
Match:	2gjkA
Description:	No description for 2gjkA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits