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View Structure Prediction Details

Protein: PCP1_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCP1_PHOLL.

Description E-value Query
Range
Subject
Range
gi|238712781, gi... - gi|77956259|ref|ZP_00820376.1| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p...
303.0 [0..1] [220..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVLITAFE PFDGEAINPS WESVRQLQNQ QLSGAHIETR QLPCVFNTSL TCLYAAIDEI  60
   61 QPELVIAVGQ AGGRPDITVE RIAININDAR IPDNQGNQPI DTPIVATGPA AYFSTLPIKA 120
  121 IVSGLQTAGV PASISQSAGT YICNHVMYGL LHHLALTYPK VRGGLVRGGF IHIPYLPEQA 180
  181 VKHPGTPSMA LETITMALKI AINQALENSG DIAISGGMTH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.0
Match: 1augA
Description: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle