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View Structure Prediction Details

Protein: PANC_PSEAE
Organism: Pseudomonas aeruginosa
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PANC_PSEAE.

Description E-value Query
Range		 Subject
Range
PANC_THEMA - Pantothenate synthetase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=...
PANC_THEMA - Pantothenate synthetase OS=Thermotoga maritima GN=panC PE=1 SV=1
 0.0 [1..280] [1..279]
PANC_PSEPF - Pantothenate synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=panC PE=3 SV=1
 0.0 [1..283] [1..283]
PANC_THENE - Pantothenate synthetase OS=Thermotoga neapolitana GN=panC PE=3 SV=1
 0.0 [1..280] [1..279]
PANC_PSEF5 - Pantothenate synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=panC PE=3 SV=1
 0.0 [1..283] [1..283]
PANC_PSE14 - Pantothenate synthetase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=panC P...
 0.0 [1..281] [1..281]
gi|194555353, gi... - gi|84323613|ref|ZP_00971682.1| COG0414: Panthothenate synthetase [Pseudomonas aeruginosa 2192], gi|2...
 0.0 [1..283] [1..283]
PANC_PSEU2 - Pantothenate synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=panC PE=3 SV=1
 0.0 [1..281] [1..281]
tr|F2K5M2|F2K5M2... - Pantothenate synthetase OS=Pseudomonas brassicacearum (strain NFM421) GN=panC PE=3 SV=1
gi|28932737 - gi|28932737|gb|AAO60161.1| pantoate-beta-alanine ligase; PanC [Pseudomonas fluorescens]
 0.0 [1..283] [1..283]
PANC_PSEPK - Pantothenate synthetase OS=Pseudomonas putida (strain KT2440) GN=panC PE=3 SV=1
 0.0 [1..283] [1..283]
PANC_PSEE4 - Pantothenate synthetase OS=Pseudomonas entomophila (strain L48) GN=panC PE=3 SV=1
gi|95112667 - gi|95112667|emb|CAK17395.1| pantoate--beta-alanine ligase [Pseudomonas entomophila L48]
 0.0 [1..283] [1..283]

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Predicted Domain #1
Region A:
Residues: [1-283] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTVKTVREL RAAVARARSE GKRIGFVPTM GNLHAGHAAL VKKAGERADF VVVSIFVNPL  60
   61 QFGPSEDLDT YPRTLAADQE RLLEAGCHLL FTPTVEEMYP DGMDGQTRIH VPGVSEGLCG 120
  121 ASRPGHFEGV ATVVSKLLNM VQPDLALFGE KDFQQLAVIR KLVRDLNLPV QIFGEPTVRA 180
  181 ADGLALSSRN GYLDEQQRAA APAIYRTLRQ LGERIRAGAE DFPALLADAR QALEQAGLRP 240
  241 DYLEIREPIS LRPGVPGDRQ LVILAAAYLG STRLIDNLSV HLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1ihoA
Description: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pantoate-beta-alanine ligase activity 2.65346774278189 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 2.3170925937521 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 2.3170925937521 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 2.30614862840764 bayes_pls_golite062009
ligase activity 1.60661539954645 bayes_pls_golite062009
pantetheine-phosphate adenylyltransferase activity 1.25694296916214 bayes_pls_golite062009
adenylyltransferase activity 1.08055019963499 bayes_pls_golite062009
nicotinate-nucleotide adenylyltransferase activity 0.692499879958128 bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity 0.567882194154248 bayes_pls_golite062009
nucleotidyltransferase activity 0.427749234863188 bayes_pls_golite062009
nucleic acid binding 0.264094677839184 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle