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View Structure Prediction Details

Protein: QRFP
Organism: Homo sapiens
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QRFP.

Description E-value Query
Range
Subject
Range
gi|71682797 - gi|71682797|gb|AAI01129.1| Pyroglutamylated RFamide peptide [Homo sapiens]
2.0E-59 [1..136] [1..136]
gi|114627226 - gi|114627226|ref|XP_001166241.1| PREDICTED: similar to preproQRFP [Pan troglodytes]
6.0E-59 [1..136] [103..238]
OX26_BOVIN - Orexigenic neuropeptide QRFP OS=Bos taurus GN=QRFP PE=2 SV=1
2.0E-53 [1..136] [1..134]
gi|109110018 - gi|109110018|ref|XP_001106500.1| PREDICTED: similar to RF(Arg-Phe)amide family 26 amino acid peptide...
8.0E-50 [1..136] [1..136]
gi|73967934 - gi|73967934|ref|XP_850751.1| PREDICTED: similar to P518 precursor protein [Canis familiaris]
1.0E-48 [1..136] [114..249]
gi|62871727 - gi|62871727|gb|AAH94274.1| Qrfp protein [Mus musculus]
3.0E-44 [2..135] [1..124]
OX26_RAT - Orexigenic neuropeptide QRFP OS=Rattus norvegicus GN=Qrfp PE=1 SV=1
4.0E-43 [17..135] [16..124]
OX26_PELES - Orexigenic neuropeptide 26RFa OS=Pelophylax esculentus PE=1 SV=1
6.0E-4 [108..133] [1..26]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPYPLIYF LFLPLGACFP LLDRREPTDA MGGLGAGERW ADLAMGPRPH SVWGSSRWLR  60
   61 ASQPQALLVI ARGLQTSGRE HAGCRFRFGR QDEGSEATGF LPAAGEKTSG PLGNLAEELN 120
  121 GYSRKKGGFS FRFGRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.241 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.238 a.118.11 Cytochrome c oxidase subunit E
View Download 0.222 a.4.3 ARID-like
View Download 0.217 a.118.13 Arp2/3 complex 16 kDa subunit ARPC5


YRC Informatics Platform - Version 3.0
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