YRC Public Data Repository - Protein Structure Prediction

Protein:	OSTCN_BOVIN
Organism:	Bos taurus
Length:	100 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSTCN_BOVIN.

Description	E-value	Query Range	Subject Range
gi\|89994012, gi\|... - gi\|90962984\|ref\|NP_001035098.1\| bone gamma-carboxyglutamate (gla) protein [Ovis aries], gi\|89994012\|...	142.0	[0..1]	[100..1]
CCDS1134.1_1 - null OSTCN_MACNE - Osteocalcin OS=Macaca nemestrina GN=BGLAP PE=3 SV=1 OSTCN_MACMU - Osteocalcin OS=Macaca mulatta GN=BGLAP PE=3 SV=1 OSTCN_ATEGE - Osteocalcin OS=Ateles geoffroyi GN=BGLAP PE=3 SV=1	129.0	[0..16]	[100..16]
gi\|46575806 - gi\|46575806\|dbj\|BAD16774.1\| osteocalcin [Rana catesbeiana]	128.0	[0..1]	[100..1]
BGLAP, OSTC - oligosaccharyltransferase complex subunit, bone gamma-carboxyglutamate (gla) protein OSTCN_GORGO - Osteocalcin OS=Gorilla gorilla gorilla GN=BGLAP PE=1 SV=2 gi\|120974391 - gi\|120974391\|gb\|ABM46680.1\| BGLAP [Gorilla gorilla]	127.0	[0..16]	[100..16]
gi\|58286828 - gi\|58286828\|gb\|AAV80233.1\| osteocalcin [Dicentrarchus labrax]	125.0	[0..1]	[100..1]
OSTCN_SPAAU - Osteocalcin OS=Sparus aurata GN=bglap PE=1 SV=2	124.0	[0..1]	[100..1]
OSTCN_XENLA - Osteocalcin OS=Xenopus laevis GN=bglap PE=1 SV=2	122.0	[0..1]	[100..1]
OSTCN_ARGRE - Osteocalcin OS=Argyrosomus regius GN=bglap PE=1 SV=1	119.0	[0..1]	[100..1]
gi\|73961569 - gi\|73961569\|ref\|XP_547536.2\| PREDICTED: similar to Osteocalcin precursor (Gamma-carboxyglutamic acid...	119.0	[0..21]	[100..23]

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Predicted Domain #1

Region A:
Residues: [1-100]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTPMLLALL ALATLCLAGR ADAKPGDAES GKGAAFVSKQ EGSEVVKRLR RYLDHWLGAP  60
   61 APYPDPLEPK REVCELNPDC DELADHIGFQ EAYRRFYGPV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits