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View Structure Prediction Details

Protein: gi|50403686, gi|...
Organism: Drosophila melanogaster
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50403686, gi|....

Description E-value Query
Range
Subject
Range
gi|408475 - gi|408475|gb|AAA21357.1| OS-C
171.0 [0..14] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRQLLLSGF LLVMLQMVTQ TQARPQDVIT VAGEETEVVI KREGDDDGDD DDSSSEETVE  60
   61 DSEESRRRRR EVNTDNTPSA RAVIPGEQVV PILLEAILPS VDAAGDRFAR SVQFLKNLTP 120
  121 GSELFAVEKN E

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.470 a.79.1 Antitermination factor NusB
View Download 0.425 a.79.1 Antitermination factor NusB
View Download 0.404 d.110.4 SNARE-like
View Download 0.332 a.79.1 Antitermination factor NusB
View Download 0.331 a.79.1 Antitermination factor NusB
View Download 0.309 a.79.1 Antitermination factor NusB
View Download 0.271 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.245 a.1.1 Globin-like
View Download 0.215 c.23.12 Formate/glycerate dehydrogenase catalytic domain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle