YRC Public Data Repository - Protein Structure Prediction

Protein:	ORM1_SACMO
Organism:	Saccharomyces monacensis
Length:	148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORM1_SACMO.

Description	E-value	Query Range	Subject Range
gi\|109114982 - gi\|109114982\|ref\|XP_001087628.1\| PREDICTED: similar to ORM1-like 3 [Macaca mulatta]	228.0	[0..2]	[136..195]
gi\|49640918 - gi\|49640918\|emb\|CAH02179.1\| KLLA0B05621p [Kluyveromyces lactis] gi\|50303687, gi\|... - gi\|50303687\|ref\|XP_451786.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640918\|emb\|CAH0217...	226.0	[0..1]	[148..57]
gi\|45185499, gi\|... - gi\|45185499\|ref\|NP_983215.1\| ACL189Cp [Ashbya gossypii ATCC 10895], gi\|44981217\|gb\|AAS51039.1\| ACL18... gi\|44981217 - gi\|44981217\|gb\|AAS51039.1\| ACL189Cp [Ashbya gossypii ATCC 10895]	223.0	[0..1]	[147..52]
ORM1 - Evolutionarily conserved protein, similar to Orm2p, required for resistance to agents that induce un... gi\|151943322 - gi\|151943322\|gb\|EDN61635.1\| conserved protein [Saccharomyces cerevisiae YJM789] ORM1_YEAST - Protein ORM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORM1 PE=1 SV=1 gi\|190406936 - gi\|190406936\|gb\|EDV10203.1\| protein ORM1 [Saccharomyces cerevisiae RM11-1a]	213.0	[0..1]	[148..75]
gi\|49527717 - gi\|49527717\|emb\|CAG61366.1\| unnamed protein product [Candida glabrata] gi\|49527717, gi\|... - gi\|50291945\|ref\|XP_448405.1\| unnamed protein product [Candida glabrata], gi\|49527717\|emb\|CAG61366.1\|...	213.0	[0..1]	[148..69]
gi\|39958445, gi\|... - gi\|39958445\|ref\|XP_364412.1\| hypothetical protein MGG_09257 [Magnaporthe grisea 70-15], gb\|EAA55450....	213.0	[0..1]	[144..39]
gi\|114145802, gi... - gi\|45478206\|gb\|AAS66274.1\| LRRGT00183 [Rattus norvegicus], gi\|114145802\|ref\|NP_001041362.1\| ORM1-lik...	212.0	[0..2]	[136..40]
gi\|115389764, gi... - gi\|115389764\|ref\|XP_001212387.1\| protein ORM1 [Aspergillus terreus NIH2624], gi\|114194783\|gb\|EAU3648...	211.0	[0..1]	[138..36]
gi\|90298266, gi\|... - gi\|90298266\|gb\|EAS27897.1\| conserved hypothetical protein [Coccidioides immitis RS], gi\|119174238\|re... gi\|240106742 - gi\|240106742\|gb\|EER24929.1\| ORM1 protein, putative [Coccidioides posadasii C735 delta SOWgp]	210.0	[0..1]	[137..36]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNATWVDQRG AWIIHVVVIT LLKLFFNLFP GVTAEWSWTL TNMTYVVGSY VMFHLIKGTP  60
   61 FDFNGGAYDN LTMWEQIDDE TLFTPSRKFL IIVPIALFLV STHYAHYDLK MFSWNCFLTT 120
  121 FVAVVPKLPV THRLRISIPG ITGRAQIS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	102.124939
Match:	PF04061.5
Description:	No description for PF04061.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.718	N/A	N/A	a.24.3	Cytochromes
View	Download	0.718	N/A	N/A	a.24.3	Cytochromes
View	Download	0.640	N/A	N/A	a.118.9	ENTH/VHS domain
View	Download	0.610	N/A	N/A	a.1.1	Globin-like
View	Download	0.607	N/A	N/A	a.24.3	Cytochromes
View	Download	0.570	N/A	N/A	a.24.18	Description not found.
View	Download	0.508	N/A	N/A	d.56.1	GroEL-intermediate domain like
View	Download	0.494	N/A	N/A	a.60.9	lambda integrase-like, N-terminal domain
View	Download	0.463	N/A	N/A	a.118.9	ENTH/VHS domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits