| Protein: | NepYr-PA |
| Organism: | Drosophila melanogaster |
| Length: | 464 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NepYr-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
329.0 | [0..1] | [464..1] |
|
Region A: Residues: [1-464] |
1 11 21 31 41 51
| | | | | |
1 MEHHNSHLLP GGSEKMYYIA HQQPMLRNED DNYQEGYFIR PDPASLIYNT TALPADDEGS 60
61 NYGYGSTTTL SGLQFETYNI TVMMNFSCDD YDLLSEDMWS SAYFKIIVYM LYIPIFIFAL 120
121 IGNGTVCYIV YSTPRMRTVT NYFIASLAIG DILMSFFCVP SSFISLFILN YWPFGLALCH 180
181 FVNYSQAVSV LVSAYTLVAI SIDRYIAIMW PLKPRITKRY ATFIIAGVWF IALATALPIP 240
241 IVSGLDIPMS PWHTKCEKYI CREMWPSRTQ EYYYTLSLFA LQFVVPLGVL IFTYARITIR 300
301 VWAKRPPGEA ETNRDQRMAR SKRKMVKMML TVVIVFTCCW LPFNILQLLL NDEEFAHWDP 360
361 LPYVWFAFHW LAMSHCCYNP IIYCYMNARF RSGFVQLMHR MPGLRRWCCL RSVGDRMNAT 420
421 SGTGPALPLN RMNTSTTYIS ARRKPRATSL RANPLSCGET SPLR
|
| Detection Method: |  |
| Confidence: | 52.221849 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
