YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NU4LM_ASCSU
Organism: Ascaris suum
Length: 77 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NU4LM_ASCSU.

Description E-value Query
Range
Subject
Range
gi|31873490, gi|... - gi|31873490|emb|CAD10442.2| NADH dehydrogenase subunit 4L [Necator americanus], gi|19111760|ref|NP_5...
82.0 [0..1] [77..1]
gi|19111748 - gi|19111748|ref|NP_579945.2|ND4L_15956 NADH dehydrogenase subunit 4L [Ancylostoma duodenale]
gi|219873105, gi... - gi|225622202|ref|YP_002725715.1| NADH dehydrogenase subunit 4 [Ancylostoma caninum], gi|219873105|gb...
82.0 [0..1] [77..1]
gi|27543262 - gi|27543262|gb|AAO16419.1| NADH dehydrogenase subunit 4L [Caenorhabditis elegans]
81.0 [0..1] [77..1]
gi|66269527, gi|... - gi|91176187|ref|YP_537101.1| NADH dehydrogenase subunit 4L [Anisakis simplex], gi|66269527|gb|AAY431...
80.0 [0..1] [77..1]
NULM_CAEBR, NU4L... - (Q8HEB9) NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3), NADH-ubiquinone oxidoreductase chain ...
79.0 [0..2] [77..1]
gi|116177494, gi... - gi|116510832|ref|YP_817450.1| NADH dehydrogenase subunit 4L [Heterorhabditis bacteriophora], gi|1161...
79.0 [0..1] [77..2]

Back

Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFIFISFLS LFFKWQRLMF ILISLEFIVM SLFILFSGDL NEMMFFYFMC FSVVSSVLGM  60
   61 VVMVGNVKFY GSDLCLF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.957 a.8.11 Description not found.
View Download 0.880 a.7.16 Description not found.
View Download 0.873 f.17.1 F1F0 ATP synthase subunit C
View Download 0.869 a.2.7 tRNA-binding arm
View Download 0.869 a.2.7 tRNA-binding arm
View Download 0.856 a.8.11 Description not found.
View Download 0.853 f.17.1 F1F0 ATP synthase subunit C
View Download 0.813 f.17.1 F1F0 ATP synthase subunit C
View Download 0.810 f.17.1 F1F0 ATP synthase subunit C
View Download 0.809 a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle