YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NPY_CARAU
Organism: Carassius auratus
Length: 96 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPY_CARAU.

Description E-value Query
Range		 Subject
Range
gi|92122706 - gi|92122706|gb|ABE73783.1| neuropeptide Y [Spinibarbus sinensis]
 160.0 [0..1] [96..1]
NPY_CYPCA - Pro-neuropeptide Y OS=Cyprinus carpio GN=npy PE=3 SV=1
 158.0 [0..1] [96..1]
NPY_DANRE - Pro-neuropeptide Y OS=Danio rerio GN=npy PE=3 SV=1
 156.0 [0..1] [96..1]
NPY_TYPNA - Pro-neuropeptide Y OS=Typhlonectes natans GN=npy PE=1 SV=1
 156.0 [0..1] [96..1]
NPY_CHICK - Pro-neuropeptide Y OS=Gallus gallus GN=NPY PE=3 SV=1
 156.0 [0..1] [96..1]
NPY_XENLA - Pro-neuropeptide Y OS=Xenopus laevis GN=npy PE=3 SV=1
 155.0 [0..1] [96..1]
gi|112419089, gi... - gi|134024445|gb|AAI35388.1| Neuropeptide Y [Xenopus tropicalis], gi|118405076|ref|NP_001072530.1| ne...
 154.0 [0..1] [96..1]
NPY_MOUSE - Pro-neuropeptide Y OS=Mus musculus GN=Npy PE=1 SV=2
 153.0 [0..1] [96..1]

Back

Predicted Domain #1
Region A:
Residues: [1-96] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPNMKMWTG WAACAFLLFV CLGTLTEGYP TKPDNPGEGA PAEELAKYYS ALRHYINLIT  60
   61 RQRYGKRSSA DTLISDLLIG ETESHPQTRY EDQLVW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle