| Protein: | NEF_HV1Z2 |
| Organism: | Human immunodeficiency virus type 1 (Z2/CDC-Z34 ISOLATE) |
| Length: | 97 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NEF_HV1Z2.
| Description | E-value | Query Range |
Subject Range |
|
|
216.0 | [0..1] | [97..1] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MGGRWSKSSI VGWPAIRERI RRTDPAADGV GAVSRDLEKH GAITSSNTRG TNADCAWLEA 60
61 QEES
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 1qa4A |
| Description: | HIV-1 Nef protein fragments |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [65-97] |
1 11 21 31 41 51
| | | | | |
1 EEVGFPVRPQ VPLRPMTYKG ALDLSHFLKE KGG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
