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View Structure Prediction Details

Protein: NB5R2_ARATH
Organism: Arabidopsis thaliana
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NB5R2_ARATH.

Description E-value Query
Range
Subject
Range
gi|14582160 - gi|14582160|gb|AAK69398.1|AF274589_1 cytochrome b5 reductase PP36 [Cucurbita maxima]
241.0 [0..3] [328..2]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL  60
   61 DQAKEETGPK TALNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 1rfkA
Description: Crystal Structure of 2Fe2S Ferredoxin from Thermophilic Cyanobacterium Mastigocladus Laminosus
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKWLEFKLQD TARVSHNTQL FRFSFDPSAE LGLHVASCLL TRAPLGYNAE GKTKYVIRPY  60
   61 TPISDPEAKG YFDLLIKVYP DGKMSQHFAS LKPGDVLEVK GPVEKFKYSP NMKKHIGMIA 120
  121 GGSGITPMLQ VIDAIVKNPE DNTQISLLYA NVSPDDILLK QKLDVLQANH PNLKIFYTVD 180
  181 NPTKNWKGGV GYISKDMALK GLPLPTDDTL ILVCGPPGMM EHISGGKAPD WSQGEVKGIL 240
  241 KELGYTEEMV FKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.30103
Match: 2eixA
Description: No description for 2eixA was found.

YRC Informatics Platform - Version 3.0
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