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View Structure Prediction Details

Protein: gi|61679377, gi|...
Organism: Drosophila melanogaster
Length: 1256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61679377, gi|....

Description E-value Query
Range
Subject
Range
gi|3668187 - gi|3668187|dbj|BAA33452.1| myosin heavy chain [Theragra chalcogramma]
848.0 [0..2] [1248..29]

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Predicted Domain #1
Region A:
Residues: [1-846]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKMLEDTQL VWVRDAAEGY IQGRITEIGA KEFEVTPTDR KYPKRTCHFD DIHSSCDGPQ  60
   61 DHDDNCELML LNEATFLDNL KTRYYKDKIY TYVANILIAV NPYREIKELY APDTIKKYNG 120
  121 RSLGELPPHV FAIADKAIRD MRVYKLSQSI IVSGESGAGK TESTKYLLKY LCYSHDSAGP 180
  181 IETKILDANP VLEAFGNAKT TRNNNSSRFG KFIEVHYDAK CQVVGGYISH YLLEKSRICT 240
  241 QSAEERNYHV FYMLLAGAPQ QLRDKLSLGK PDDYRYLSGC TQYFANAKTE QLIPGSQKSK 300
  301 NHQQKGPLKD PIIDDYQHFH NLDKALGRLG LSDTEKLGIY SLVAAVLHLG NIAFEEIPDD 360
  361 VRGGCQVSEA SEQSLTITSG LLGVDQTELR TALVSRVMQS KGGGFKGTVI MVPLKIYEAS 420
  421 NARDALAKAI YSRLFDRIVG LINQSIPFQA SNFYIGVLDI AGFEYFTVNS FEQFCINYCN 480
  481 EKLQKFFNDN ILKNEQELYK REGLNVPEIT FTDNQDIIEL IEAKSNGIFT LLDEESKLPK 540
  541 PSYSHFTAEV HKSWANHYRL GLPRSSRLKA HRTLRDEEGF LVRHFAGAVC YNTEQFIEKN 600
  601 NDALHASLEG LVQECDNPLL QTLFPSGSST SVRGKLNFIS VGSKFKTQLG ELMEKLEQNG 660
  661 TNFIRCIKPN SKMIDRQFEG SLALAQLKCS GTISVLELME HGYPSRVLFA DLYSMYKSVL 720
  721 PPELVSLPAR TFCEAMFQSL NLSAKDFKFG ITKVFFRPGK FVEFDRIMRS DPENMLAIVA 780
  781 KVKKWLIRSR WVKSALGALC VIKLRNRIIY RNKCVLIAQR IARGFLARKQ HRPRYQGIGK 840
  841 INKIRT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2bkiA
Description: Myosin VI nucleotide-free (MDinsert2-IQ) crystal structure.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [847-1256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTLKTIEIAS GLKMGREEII SGVNDIYRQI DDAIKKIKMN PRITQREMDS MYTVVMANMN  60
   61 KLTVDLNTKL KEQQQAEEQE RLRKIQEALE AERAAKEAEE QRQREEIENK RLKAEMETRR 120
  121 KAAEAQRLRQ EEEDRRAALA LQEQLEKEAK DDAKYRQQLE QERRDHELAL RLANESNGQV 180
  181 EDSPPVIRNG VNDASPMGPN KLIRSENVRA QQQALGKQKY DLSKWKYSEL RDAINTSCDI 240
  241 ELLEACRQEF HRRLKVYHAW KAKNRKRTTM DENERAPRSV MEAAFKQPPL VQPIQEIVTA 300
  301 QHRYFRIPFM RANAPDNTKR GLWYAHFDGQ WIARQMELHA DKPPILLVAG TDDMQMCELS 360
  361 LEETGLTRKR GAEILEHEFN REWERNGGKA YKNLGAAKPN GPAAAMQKQQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle