YRC Public Data Repository - Protein Structure Prediction

Protein:	IMPA1_BOVIN
Organism:	Bos taurus
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMPA1_BOVIN.

Description	E-value	Query Range	Subject Range
gi\|67971222 - gi\|67971222\|dbj\|BAE01953.1\| unnamed protein product [Macaca fascicularis]	296.0	[0..1]	[277..1]
IMPA1_PONPY - Inositol monophosphatase - Pongo pygmaeus (Orangutan) IMPA1_PONAB - Inositol monophosphatase 1 OS=Pongo abelii GN=IMPA1 PE=2 SV=1	295.0	[0..1]	[277..1]
gi\|109086796, gi... - gi\|109086798\|ref\|XP_001092711.1\| PREDICTED: inositol(myo)-1(or 4)-monophosphatase 1 isoform 2 [Macac...	295.0	[0..1]	[277..1]
IMPA1 - inositol(myo)-1(or 4)-monophosphatase 1	295.0	[0..1]	[277..1]
gi\|114620630, gi... - gi\|114620632\|ref\|XP_001168801.1\| PREDICTED: inositol(myo)-1(or 4)-monophosphatase 1 isoform 7 [Pan t...	294.0	[0..1]	[277..60]
IMPA1_PIG - Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1	293.0	[0..1]	[277..1]
IMPA1_RAT - Inositol monophosphatase 1 OS=Rattus norvegicus GN=Impa1 PE=1 SV=2	290.0	[0..1]	[276..1]

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Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPWQECMD YAVTLAGQAG EVVREALKNE MNIMVKSSPA DLVTATDQKV EKMLITSIKE  60
   61 KYPSHSFIGE ESVAAGEKSI LTDNPTWIID PIDGTTNFVH GFPFVAVSIG FVVNKKMEFG 120
  121 IVYSCLEDKM YTGRKGKGAF CNGQKLQVSH QEDITKSLLV TELGSSRTPE TVRIILSNIE 180
  181 RLLCLPIHGI RGVGTAALNM CLVAAGAADA YYEMGIHCWD VAGAGIIVTE AGGVLLDVTG 240
  241 GPFDLMSRRV IASSNKTLAE RIAKEIQIIP LQRDDED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	79.221849
Match:	2bjiA
Description:	High Resolution Structure of myo-Inositol Monophosphatase, The Target of Lithium Therapy
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits