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View Structure Prediction Details

Protein: CE41077
Organism: Caenorhabditis elegans
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41077.

Description E-value Query
Range
Subject
Range
CE38656 - WBGene00022179 status:Predicted TR:Q9BL42 protein_id:AAK29967.2
321.0 [0..42] [337..1]
gi|187035612, gi... - gi|39590110|emb|CAE61108.1| Hypothetical protein CBG04865 [Caenorhabditis briggsae], gi|187035612|em...
gi|157765554 - gi|157765554|ref|XP_001675120.1| Hypothetical protein CBG04865 [Caenorhabditis briggsae AF16]
307.0 [0..6] [318..50]

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Predicted Domain #1
Region A:
Residues: [1-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNCRSRIA EFQASLPVGA PKKFLSSSLA AQSGLGNHLF EMASLLGMSR VLNRTPILFV  60
   61 EDKNYEGMWK STKEAIPGLI EKFQIVHGKV PSHNKPIQFS KLCCVYVDPR VLENMNDEFL 120
  121 HLDSHFYQSW KYFAGMQREL IGYVKKSGNY SSLPRSTDNV FVTCAHVRRG DFLSVGFAVA 180
  181 DERFVINALD FMEKKDPSTH AKKATVLFGD TLEFLELIYN SLNKNKSSTT YFIAKNRNHD 240
  241 DLLYAKENCD AVLIASPHST FGWWMGYLSK GNKVYYMDIR ETNDPIYRRG ELNPYDYFAE 300
  301 NWTPLKYDID NQTIIRKLMC FHFSKIGKKL NRYPHAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.09691
Match: 2hhcA
Description: No description for 2hhcA was found.

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